RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 EGFP01133 1207 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 PDGFRBP09619 1106 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 USP17L7P0C7H9 530 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 GJA4P35212 333 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 MAGEA11P43364 429 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 PXNP49023 591 aaPredicted RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 PSMC1P62191 440 aaKnown RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 C4orf50Q6ZRC1 276 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 EPM2AIP1Q7L775 607 aaPredicted RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 WDR49Q8IV35 697 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 ARL14EPQ8N8R7 260 aaPredicted RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 IQUBQ8NA54 791 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 OSCP1Q8WVF1 389 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 DHX58Q96C10 678 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 MMS19Q96T76 1030 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 P2RY13Q9BPV8 354 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 ECT2Q9H8V3 914 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 CRTAC1Q9NQ79 661 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 SLC8A2Q9UPR5 921 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 AXIN1O15169 862 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 EIF3DO15371 548 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL16A1-210ENST00000474000 TGFB1I1O43294 461 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 CKMP06732 381 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 HDCP19113 662 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 DRD1P21728 446 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 KCNA4P22459 653 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 WARSP23381 471 aaKnown RBP12.86□□□□□ -0.35
COL16A1-210ENST00000474000 BDNFP23560 247 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 GNL1P36915 607 aaPredicted RBP12.86□□□□□ -0.35
COL16A1-210ENST00000474000 GRIK1P39086 918 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 ASIC1P78348 528 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 MTF1Q14872 753 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 MAPRE1Q15691 268 aaKnown RBP12.86□□□□□ -0.35
COL16A1-210ENST00000474000 NAIF1Q69YI7 327 aaPredicted RBP12.86□□□□□ -0.35
COL16A1-210ENST00000474000 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 CPA6Q8N4T0 437 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 MYLPFQ96A32 169 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 SPATA17Q96L03 361 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 C7orf25Q9BPX7 421 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 SYT15Q9BQS2 421 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
COL16A1-210ENST00000474000 POLR3BQ9NW08 1133 aaPredicted RBP12.86□□□□□ -0.35
COL16A1-210ENST00000474000 MYH11P35749 1972 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CCDC163A0A0D9SF12 145 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CUTAO60888 179 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 RNF40O75150 1001 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 RPP40O75818 363 aaKnown RBP12.85□□□□□ -0.35
COL16A1-210ENST00000474000 DLATP10515 647 aaKnown RBP12.85□□□□□ -0.35
COL16A1-210ENST00000474000 TNNI1P19237 187 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 ZNF77Q15935 545 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CCDC6Q16204 474 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
COL16A1-210ENST00000474000 FAM26FQ5R3K3 315 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CACNA2D4Q7Z3S7 1137 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 SH3RF2Q8TEC5 729 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 SCFD1Q8WVM8 642 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 GAB3Q8WWW8 586 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 ATP2A3Q93084 1043 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 EXOC4Q96A65 974 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CCDC127Q96BQ5 260 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 PCED1BQ96HM7 432 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CEP295NLQ96MC4 621 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 MRPL45Q9BRJ2 306 aaKnown RBP12.85□□□□□ -0.35
COL16A1-210ENST00000474000 ARRDC1-AS1Q9H2J1 176 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 LINC00597Q9H2U6 94 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 SNX25Q9H3E2 840 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 WNT6Q9Y6F9 365 aa12.85□□□□□ -0.35
COL16A1-210ENST00000474000 CLIC2O15247 247 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 YEATS4O95619 227 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 IFNAR2P48551 515 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 CYP2J2P51589 502 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 USP46P62068 366 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 SNRPFP62306 86 aaKnown RBP12.84□□□□□ -0.35
COL16A1-210ENST00000474000 CYP24A1Q07973 514 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 NR1H3Q13133 447 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 KCNB1Q14721 858 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 PSMD6Q15008 389 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 SF3A2Q15428 464 aaKnown RBP12.84□□□□□ -0.35
COL16A1-210ENST00000474000 EML3Q32P44 896 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 WDR72Q3MJ13 1102 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 FBXO43Q4G163 708 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 FOXD4L5Q5VV16 416 aaPredicted RBP12.84□□□□□ -0.35
COL16A1-210ENST00000474000 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
COL16A1-210ENST00000474000 NELFCDQ8IXH7 590 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms