RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 FUKQ8N0W3 1084 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 TDRD5Q8NAT2 981 aaKnown RBP13.18□□□□□ -0.3
DDX56-209ENST00000473924 SLC4A11Q8NBS3 891 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 JAKMIP2Q96AA8 810 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 KREMEN1Q96MU8 473 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
DDX56-209ENST00000473924 DMAP1Q9NPF5 467 aaPredicted RBP13.18□□□□□ -0.3
DDX56-209ENST00000473924 KRT82Q9NSB4 513 aa13.18□□□□□ -0.3
DDX56-209ENST00000473924 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
DDX56-209ENST00000473924 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 SLC38A8A6NNN8 435 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 F8VP50 259 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 FGF19O95750 216 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 SERPINC1P01008 464 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 FAM200BP0CF97 657 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 ACO1P21399 889 aaKnown RBP13.17□□□□□ -0.3
DDX56-209ENST00000473924 USP8P40818 1118 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 ZP2Q05996 745 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 KCNMA1Q12791 1236 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 SGO2Q562F6 1265 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 PPP1R26Q5T8A7 1209 aaPredicted RBP13.17□□□□□ -0.3
DDX56-209ENST00000473924 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 UBR7Q8N806 425 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 RBBP8NLQ8NC74 664 aaPredicted RBP13.17□□□□□ -0.3
DDX56-209ENST00000473924 STKLD1Q8NE28 680 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 ING5Q8WYH8 240 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 C8orf48Q96LL4 319 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 GCNAQ96QF7 691 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 UHRF1Q96T88 793 aaPredicted RBP13.17□□□□□ -0.3
DDX56-209ENST00000473924 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
DDX56-209ENST00000473924 SIX2Q9NPC8 291 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX56-209ENST00000473924 DNAJC12Q9UKB3 198 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
DDX56-209ENST00000473924 C2CD4DB7Z1M9 353 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 PAEPP09466 180 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 VDRP11473 427 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 GABRR2P28476 465 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 MAP3K7CLP57077 242 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 SLC8A3P57103 927 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 RAPGEF1Q13905 1077 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 CEP295NLQ96MC4 621 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
DDX56-209ENST00000473924 KCNK16Q96T55 309 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
DDX56-209ENST00000473924 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 UXTQ9UBK9 157 aaPredicted RBP13.16□□□□□ -0.3
DDX56-209ENST00000473924 HESX1Q9UBX0 185 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
DDX56-209ENST00000473924 SPTBN5Q9NRC6 3674 aaKnown RBP13.16□□□□□ -0.3
DDX56-209ENST00000473924 PTPRDP23468 1912 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 A0A1W2PRU2 124 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
DDX56-209ENST00000473924 GJA1P17302 382 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 RFX1P22670 979 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 CDC25CP30307 473 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 CCR2P41597 374 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 EPHA5P54756 1037 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
DDX56-209ENST00000473924 SYCP1Q15431 976 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 ARHGAP15Q53QZ3 475 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 PRSS36Q5K4E3 855 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 KLHDC7AQ5VTJ3 777 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 APTXQ7Z2E3 356 aaKnown RBP13.15□□□□□ -0.3
DDX56-209ENST00000473924 TMC8Q8IU68 726 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 GJD3Q8N144 294 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 FGF13Q92913 245 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 TCEAL4Q96EI5 215 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 MYADMQ96S97 322 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 LRRC3Q9BY71 257 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 SLITRK6Q9H5Y7 841 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 ZNF334Q9HCZ1 680 aaPredicted RBP13.15□□□□□ -0.3
DDX56-209ENST00000473924 PLCB1Q9NQ66 1216 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
DDX56-209ENST00000473924 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
DDX56-209ENST00000473924 DOCK6Q96HP0 2047 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 NOL4O94818 638 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 MICAL2O94851 1124 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 RTN3O95197 1032 aaPredicted RBP13.14□□□□□ -0.31
DDX56-209ENST00000473924 LAMP2P13473 410 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 UCHL3P15374 230 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 HMGA1P17096 107 aaKnown RBP13.14□□□□□ -0.31
DDX56-209ENST00000473924 NPR3P17342 541 aa13.14□□□□□ -0.31
DDX56-209ENST00000473924 CEBPBP17676 345 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms