RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 KIAA0319Q5VV43 1072 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 CCDC137Q6PK04 289 aaKnown RBP18.97■□□□□ 0.63
VARS2-206ENST00000473916 MAATS1Q7Z4T9 603 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 JAMLQ86YT9 394 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 HACE1Q8IYU2 909 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 SLC2A14Q8TDB8 520 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 IPO4Q8TEX9 1081 aaKnown RBP18.97■□□□□ 0.63
VARS2-206ENST00000473916 SLC35F5Q8WV83 523 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 UBE2Q2Q8WVN8 375 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 RAPGEF5Q92565 580 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 GIT1Q9Y2X7 761 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 TSC2P49815 1807 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 I3L4J1 428 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 KRT1P04264 644 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 KRT10P13645 584 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 HSPA6P17066 643 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 YY1P25490 414 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 CLUL1Q15846 466 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 CYP1B1Q16678 543 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 ZFYVE27Q5T4F4 411 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 ARHGAP17Q68EM7 881 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 RTN4RL1Q86UN2 441 aaPredicted RBP18.96■□□□□ 0.63
VARS2-206ENST00000473916 CRYBG2Q8N1P7 616 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 TOP6BLQ8N6T0 577 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 CLEC4CQ8WTT0 213 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 SENP8Q96LD8 212 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 UBXN6Q9BZV1 441 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 UNC93B1Q9H1C4 597 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 ZWILCHQ9H900 591 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 RSAD1Q9HA92 442 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 SLC38A7Q9NVC3 462 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 WDR35Q9P2L0 1181 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 PTPN22Q9Y2R2 807 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 CLDN5O00501 218 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 ZNF623O75123 536 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 WARSP23381 471 aaKnown RBP18.96■□□□□ 0.63
VARS2-206ENST00000473916 FLT3P36888 993 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 COILP38432 576 aaPredicted RBP18.96■□□□□ 0.63
VARS2-206ENST00000473916 SLC25A11Q02978 314 aaKnown RBP18.96■□□□□ 0.63
VARS2-206ENST00000473916 KLF1Q13351 362 aaPredicted RBP18.96■□□□□ 0.63
VARS2-206ENST00000473916 HLTFQ14527 1009 aaKnown RBP eCLIP18.96■□□□□ 0.63
VARS2-206ENST00000473916 STILQ15468 1287 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 KCNT1Q5JUK3 1230 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 MFSD7Q6UXD7 560 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 SCUBE3Q8IX30 993 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 SLC43A3Q8NBI5 491 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 EXD1Q8NHP7 514 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 LINC01599Q8WXQ3 324 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 SLITRK1Q96PX8 696 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 TSEN34Q9BSV6 310 aaKnown RBP18.96■□□□□ 0.63
VARS2-206ENST00000473916 OSBPL8Q9BZF1 889 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.96■□□□□ 0.63
VARS2-206ENST00000473916 HESX1Q9UBX0 185 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 MTUS1Q9ULD2 1270 aa18.96■□□□□ 0.63
VARS2-206ENST00000473916 MKI67P46013 3256 aaKnown RBP18.96■□□□□ 0.63
VARS2-206ENST00000473916 F8W810 466 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 PAPSS1O43252 624 aaPredicted RBP18.95■□□□□ 0.62
VARS2-206ENST00000473916 CHRNA3P32297 505 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 SMC1AQ14683 1233 aaKnown RBP18.95■□□□□ 0.62
VARS2-206ENST00000473916 C15orf59Q2T9L4 293 aaPredicted RBP18.95■□□□□ 0.62
VARS2-206ENST00000473916 OLFML1Q6UWY5 402 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 B3GALNT2Q8NCR0 500 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 HASPINQ8TF76 798 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 PLVAPQ9BX97 442 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 SLC4A5Q9BY07 1137 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 MIS12Q9H081 205 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 PCYOX1Q9UHG3 505 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 RABGGTBP53611 331 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 UPP1Q16831 310 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 KAZNQ674X7 775 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 EMBQ6PCB8 327 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 SEC14L1Q92503 715 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 KHSRPQ92945 711 aaKnown RBP eCLIP18.95■□□□□ 0.62
VARS2-206ENST00000473916 TRAIPQ9BWF2 469 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 PCSK1NQ9UHG2 260 aa18.95■□□□□ 0.62
VARS2-206ENST00000473916 TET1Q8NFU7 2136 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 RAB27AP51159 221 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 ZNF598Q86UK7 904 aaKnown RBP18.94■□□□□ 0.62
VARS2-206ENST00000473916 ECHDC2Q86YB7 292 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 CCDC105Q8IYK2 499 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 C12orf50Q8NA57 414 aaPredicted RBP18.94■□□□□ 0.62
VARS2-206ENST00000473916 ANKRD52Q8NB46 1076 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 FNIP1Q8TF40 1166 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 RXFP2Q8WXD0 754 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 CAVIN3Q969G5 261 aa18.94■□□□□ 0.62
VARS2-206ENST00000473916 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.94■□□□□ 0.62
VARS2-206ENST00000473916 UTP11Q9Y3A2 253 aaKnown RBP18.94■□□□□ 0.62
VARS2-206ENST00000473916 C2CD4BA6NLJ0 364 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 ARVCFO00192 962 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 GABRDO14764 452 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 B4GALT3O60512 393 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 BEST1O76090 585 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 BST2Q10589 180 aaKnown RBP18.93■□□□□ 0.62
VARS2-206ENST00000473916 DHX34Q14147 1143 aaKnown RBP18.93■□□□□ 0.62
VARS2-206ENST00000473916 MTFR1Q15390 333 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 TIGD5Q53EQ6 642 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 DUPD1Q68J44 220 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 TMEM110Q86TL2 294 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 FUKQ8N0W3 1084 aa18.93■□□□□ 0.62
VARS2-206ENST00000473916 CFAP57Q96MR6 1250 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms