RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 NFICP08651 508 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 CSH1P0DML2 217 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 CSH2P0DML3 217 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 DPP6P42658 865 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 FXR2P51116 673 aaKnown RBP eCLIP17.47■□□□□ 0.39
HPS4-210ENST00000473782 ATXN3P54252 364 aaPredicted RBP17.47■□□□□ 0.39
HPS4-210ENST00000473782 DDR2Q16832 855 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 SLC41A1Q8IVJ1 513 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 TRMT2BQ96GJ1 504 aaKnown RBP17.47■□□□□ 0.39
HPS4-210ENST00000473782 SPACA7Q96KW9 195 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 PI4K2AQ9BTU6 479 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 DKK4Q9UBT3 224 aa17.47■□□□□ 0.39
HPS4-210ENST00000473782 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
HPS4-210ENST00000473782 CYB561D2O14569 222 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 USP17L7P0C7H9 530 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 PAX3P23760 479 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 TIE1P35590 1138 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 STRN3Q13033 797 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 NR1H3Q13133 447 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 C12orf40Q86WS4 652 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 MARCH9Q86YJ5 346 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 ADGRG2Q8IZP9 1017 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
HPS4-210ENST00000473782 HMGB4Q8WW32 186 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 TSPAN18Q96SJ8 248 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 CCSER1Q9C0I3 900 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 TRPC7Q9HCX4 862 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 PCDHB5Q9Y5E4 795 aa17.46■□□□□ 0.39
HPS4-210ENST00000473782 HELZP42694 1942 aaKnown RBP17.45■□□□□ 0.38
HPS4-210ENST00000473782 TRAV19A0A0A6YYK7 116 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 PP2D1A8MPX8 630 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 XPOTO43592 962 aaKnown RBP17.45■□□□□ 0.38
HPS4-210ENST00000473782 JAK2O60674 1132 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 REC8O95072 547 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 CYP17A1P05093 508 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 PLS3P13797 630 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 CYP2F1P24903 491 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 GUCY2CP25092 1073 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 CDC25AP30304 524 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 ZNF33AQ06730 810 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 SLC14A1Q13336 389 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 TOGARAM2Q6ZUX3 1019 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 GLRX5Q86SX6 157 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 IGSF22Q8N9C0 903 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 KCNN1Q92952 543 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 PKMYT1Q99640 499 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 MMTAG2Q9BU76 263 aaKnown RBP17.45■□□□□ 0.38
HPS4-210ENST00000473782 LRWD1Q9UFC0 647 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 CPSF3Q9UKF6 684 aaKnown RBP17.45■□□□□ 0.38
HPS4-210ENST00000473782 DSEQ9UL01 958 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 HCN2Q9UL51 889 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 ARHGAP26Q9UNA1 814 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 PTPRBP23467 1997 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 ZNF462Q96JM2 2506 aa17.45■□□□□ 0.38
HPS4-210ENST00000473782 EIF4E1BA6NMX2 242 aaKnown RBP17.44■□□□□ 0.38
HPS4-210ENST00000473782 EPB41L2O43491 1005 aaKnown RBP17.44■□□□□ 0.38
HPS4-210ENST00000473782 PRPF40AO75400 957 aaKnown RBP17.44■□□□□ 0.38
HPS4-210ENST00000473782 DKK1O94907 266 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 NFATC1O95644 943 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 CKMP06732 381 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 RAD51AP2Q09MP3 1159 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 ME3Q16798 604 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 CCDC142Q17RM4 750 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 HSF5Q4G112 596 aaPredicted RBP17.44■□□□□ 0.38
HPS4-210ENST00000473782 NAXDQ8IW45 347 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 THEM5Q8N1Q8 247 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 PHTF2Q8N3S3 785 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 SNX29Q8TEQ0 813 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 PYM1Q9BRP8 204 aaKnown RBP17.44■□□□□ 0.38
HPS4-210ENST00000473782 RPF1Q9H9Y2 349 aaKnown RBP17.44■□□□□ 0.38
HPS4-210ENST00000473782 CD248Q9HCU0 757 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 POLMQ9NP87 494 aaPredicted RBP17.44■□□□□ 0.38
HPS4-210ENST00000473782 TOR4AQ9NXH8 423 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 DNM3Q9UQ16 869 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 ANAPC1Q9H1A4 1944 aa17.44■□□□□ 0.38
HPS4-210ENST00000473782 A0A087WV48 116 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 A0A0B4J269 797 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 TCRBV21S2A2A0A5A6 115 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 OGTO15294 1046 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 AP5Z1O43299 807 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 KAT7O95251 611 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 GABRG2P18507 467 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 RPL6Q02878 288 aaKnown RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 ORC2Q13416 577 aaPredicted RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 PDIA5Q14554 519 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 IL17AQ16552 155 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 LMBRD2Q68DH5 695 aaPredicted RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 SCARA3Q6AZY7 606 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 SLC39A4Q6P5W5 647 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 TMPRSS7Q7RTY8 843 aa17.43■□□□□ 0.38
HPS4-210ENST00000473782 DCP1BQ8IZD4 617 aaKnown RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 LEO1Q8WVC0 666 aaPredicted RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 YTHDC1Q96MU7 727 aaKnown RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 KIAA1522Q9P206 1035 aaPredicted RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 BCCIPQ9P287 314 aaKnown RBP eCLIP17.43■□□□□ 0.38
HPS4-210ENST00000473782 UXTQ9UBK9 157 aaPredicted RBP17.43■□□□□ 0.38
HPS4-210ENST00000473782 IGHV1OR15-9A0A0B4J2B8 117 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms