RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 RPP40O75818 363 aaKnown RBP20.91■□□□□ 0.94
APTX-218ENST00000473270 ITGB3P05106 788 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 COL4A2P08572 1712 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 TMEM191BP0C7N4 346 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 PCSK1P29120 753 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 POLR2BP30876 1174 aaKnown RBP20.91■□□□□ 0.94
APTX-218ENST00000473270 DMWDQ09019 674 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 MYO1EQ12965 1108 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 NR1H3Q13133 447 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 SRSF5Q13243 272 aaKnown RBP20.91■□□□□ 0.94
APTX-218ENST00000473270 PPM1JQ5JR12 505 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 EPM2AIP1Q7L775 607 aaPredicted RBP20.91■□□□□ 0.94
APTX-218ENST00000473270 SPATA2LQ8IUW3 424 aaPredicted RBP20.91■□□□□ 0.94
APTX-218ENST00000473270 CPA6Q8N4T0 437 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 FAM160A2Q8N612 972 aaPredicted RBP20.91■□□□□ 0.94
APTX-218ENST00000473270 CSGALNACT2Q8N6G5 542 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 KIAA0895Q8NCT3 520 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 ACBD6Q9BR61 282 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 FGFBP2Q9BYJ0 223 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 IL21Q9HBE4 155 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 TRPC7Q9HCX4 862 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 ABCB6Q9NP58 842 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 DDX43Q9NXZ2 648 aaKnown RBP20.91■□□□□ 0.94
APTX-218ENST00000473270 MAN1B1Q9UKM7 699 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 ITGA11Q9UKX5 1188 aa20.91■□□□□ 0.94
APTX-218ENST00000473270 CCDC163A0A0D9SF12 145 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 DRD1P21728 446 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 PPP1R2P41236 205 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 LHX1P48742 406 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 STIM1Q13586 685 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 BMT2Q1RMZ1 405 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 FBXO43Q4G163 708 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 TXNDC8Q6A555 127 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 LRRTM3Q86VH5 581 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 MON1AQ86VX9 555 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 GLIS3Q8NEA6 775 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 SCFD1Q8WVM8 642 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 GAB3Q8WWW8 586 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 LOXL4Q96JB6 756 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 CNTNAP3BQ96NU0 1288 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 CNTNAP3Q9BZ76 1288 aa20.9■□□□□ 0.94
APTX-218ENST00000473270 NUP210Q8TEM1 1887 aaPredicted RBP20.9■□□□□ 0.94
APTX-218ENST00000473270 TRAV19A0A0A6YYK7 116 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 BIN1O00499 593 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 AXIN1O15169 862 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 CKMP06732 381 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 USP17L7P0C7H9 530 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 GARTP22102 1010 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 IFNAR2P48551 515 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 PDE6CP51160 858 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 RBP5P82980 135 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 KNOP1Q1ED39 458 aaKnown RBP20.89■□□□□ 0.93
APTX-218ENST00000473270 TMEM196Q5HYL7 178 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 ISM2Q6H9L7 571 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 CAVIN1Q6NZI2 390 aaKnown RBP20.89■□□□□ 0.93
APTX-218ENST00000473270 BRSK2Q8IWQ3 736 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 NELFCDQ8IXH7 590 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 EFCAB13Q8IY85 973 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 PDCL2Q8N4E4 241 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 CAMKK1Q8N5S9 505 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 LRRC52Q8N7C0 313 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 SPATA18Q8TC71 538 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 USP13Q92995 863 aaPredicted RBP20.89■□□□□ 0.93
APTX-218ENST00000473270 ATP2A3Q93084 1043 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 SAAL1Q96ER3 474 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 ANKRD36BP1Q96IX9 119 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 FAM83CQ9BQN1 747 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 SNX9Q9Y5X1 595 aa20.89■□□□□ 0.93
APTX-218ENST00000473270 TRDMT1O14717 391 aaKnown RBP20.88■□□□□ 0.93
APTX-218ENST00000473270 EXTL3O43909 919 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 F11P03951 625 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 SNRPFP62306 86 aaKnown RBP20.88■□□□□ 0.93
APTX-218ENST00000473270 MORC3Q14149 939 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 ZNF268Q14587 947 aaPredicted RBP20.88■□□□□ 0.93
APTX-218ENST00000473270 TRIM68Q6AZZ1 485 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 CRELD2Q6UXH1 353 aaPredicted RBP20.88■□□□□ 0.93
APTX-218ENST00000473270 C4orf50Q6ZRC1 276 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 HS2ST1Q7LGA3 356 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 SCN4BQ8IWT1 228 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 GUF1Q8N442 669 aaKnown RBP20.88■□□□□ 0.93
APTX-218ENST00000473270 GOLGA5Q8TBA6 731 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 P2RY13Q9BPV8 354 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 DUS2Q9NX74 493 aaKnown RBP20.88■□□□□ 0.93
APTX-218ENST00000473270 EHD2Q9NZN4 543 aa20.88■□□□□ 0.93
APTX-218ENST00000473270 CGNQ9P2M7 1197 aaKnown RBP20.88■□□□□ 0.93
APTX-218ENST00000473270 KIAA0391O15091 583 aaKnown RBP20.87■□□□□ 0.93
APTX-218ENST00000473270 LETM1O95202 739 aaPredicted RBP20.87■□□□□ 0.93
APTX-218ENST00000473270 TNNC2P02585 160 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 ADRB1P08588 477 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 HMGA1P17096 107 aaKnown RBP20.87■□□□□ 0.93
APTX-218ENST00000473270 ADSSP30520 456 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 KCNA1Q09470 495 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 MAPRE1Q15691 268 aaKnown RBP20.87■□□□□ 0.93
APTX-218ENST00000473270 ELF2Q15723 593 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 DDR2Q16832 855 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 COBLL1Q53SF7 1204 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 INTS6LQ5JSJ4 861 aaKnown RBP20.87■□□□□ 0.93
APTX-218ENST00000473270 ADGRF2Q8IZF7 708 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 ACDQ96AP0 544 aa20.87■□□□□ 0.93
APTX-218ENST00000473270 ARRDC1-AS1Q9H2J1 176 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms