RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CMA1P23946 247 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 ID4P47928 161 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 PSMC1P62191 440 aaKnown RBP16.35■□□□□ 0.21
VTI1A-203ENST00000472892 SATB1Q01826 763 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 STK4Q13043 487 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 RUNX3Q13761 415 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 CCINQ13939 588 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 PON2Q15165 354 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 SCN4BQ8IWT1 228 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 KIAA2013Q8IYS2 634 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 MYCBPAPQ8TBZ2 947 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 TMEM174Q8WUU8 243 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 MYLPFQ96A32 169 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 MRPL45Q9BRJ2 306 aaKnown RBP16.35■□□□□ 0.21
VTI1A-203ENST00000472892 HPS4Q9NQG7 708 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 NME7Q9Y5B8 376 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 FRYLO94915 3013 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 OTOL1A6NHN0 477 aaPredicted RBP16.34■□□□□ 0.21
VTI1A-203ENST00000472892 EXOC3O60645 756 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 BDNFP23560 247 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 ATICP31939 592 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 CLDN10P78369 228 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 FOXK2Q01167 660 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 PSMD2Q13200 908 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 WDR72Q3MJ13 1102 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 RIN3Q8TB24 985 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 GOLGA5Q8TBA6 731 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 CHFRQ96EP1 664 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 PCED1BQ96HM7 432 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 SLC22A12Q96S37 553 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 CYP2S1Q96SQ9 504 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 HINFPQ9BQA5 517 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 XYLT2Q9H1B5 865 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 SNX25Q9H3E2 840 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 EBF3Q9H4W6 596 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 DMAC2Q9NW81 257 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 USP25Q9UHP3 1055 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 ZDHHC9Q9Y397 364 aa16.34■□□□□ 0.21
VTI1A-203ENST00000472892 DENND4CQ5VZ89 1909 aa16.33■□□□□ 0.21
VTI1A-203ENST00000472892 DCHS1Q96JQ0 3298 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 GPR179Q6PRD1 2367 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 USP17L7P0C7H9 530 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 GRIK1P39086 918 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 MYL6P60660 151 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 CYP27A1Q02318 531 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 FAM160A1Q05DH4 1040 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 TRPC3Q13507 836 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 PDGFRLQ15198 375 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 KMT5BQ4FZB7 885 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 TRIM68Q6AZZ1 485 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.2
VTI1A-203ENST00000472892 Q6ZS52 159 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 FSIP1Q8NA03 581 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 PLEKHO2Q8TD55 490 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 VRTNQ9H8Y1 702 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 SMG5Q9UPR3 1016 aaKnown RBP16.33■□□□□ 0.2
VTI1A-203ENST00000472892 HPSEQ9Y251 543 aa16.33■□□□□ 0.2
VTI1A-203ENST00000472892 TRAV19A0A0A6YYK7 116 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 A0A1B0GVL5 298 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 K7ESF4 209 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 TRDMT1O14717 391 aaKnown RBP16.32■□□□□ 0.2
VTI1A-203ENST00000472892 MYL1P05976 194 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 PFKFB1P16118 471 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 PTPN1P18031 435 aaKnown RBP16.32■□□□□ 0.2
VTI1A-203ENST00000472892 CASP4P49662 377 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 AP3M2P53677 418 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 TNNC1P63316 161 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 AMPD2Q01433 879 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 TMEM196Q5HYL7 178 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 DENND5BQ6ZUT9 1274 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 ERMP1Q7Z2K6 904 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
VTI1A-203ENST00000472892 C8orf48Q96LL4 319 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 TTLL2Q9BWV7 592 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 TRPC7Q9HCX4 862 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 C2orf42Q9NWW7 574 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 NCDNQ9UBB6 729 aa16.32■□□□□ 0.2
VTI1A-203ENST00000472892 FAM237AA0A1B0GTK4 181 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 C2orf78A6NCI8 922 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 TRIM66O15016 1216 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 C4BPAP04003 597 aaKnown RBP16.31■□□□□ 0.2
VTI1A-203ENST00000472892 ARSAP15289 507 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 TCF3P15923 654 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 PFKLP17858 780 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 HDCP19113 662 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 ANXA13P27216 316 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 HOXA6P31267 233 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 USP46P62068 366 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
VTI1A-203ENST00000472892 DMWDQ09019 674 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 MTF1Q14872 753 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 ZNF77Q15935 545 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 MDH1BQ5I0G3 518 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 FSTL4Q6MZW2 842 aa16.31■□□□□ 0.2
VTI1A-203ENST00000472892 GPR161Q8N6U8 529 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms