RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 NELL1Q92832 810 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 USP13Q92995 863 aaPredicted RBP9.54□□□□□ -0.88
CHEK2-223ENST00000472807 MYRFLQ96LU7 910 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 CEP295NLQ96MC4 621 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 EPC1Q9H2F5 836 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 NCDNQ9UBB6 729 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 MAGEC2Q9UBF1 373 aaPredicted RBP9.54□□□□□ -0.88
CHEK2-223ENST00000472807 USP25Q9UHP3 1055 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 RCOR1Q9UKL0 485 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 SMG5Q9UPR3 1016 aaKnown RBP9.54□□□□□ -0.88
CHEK2-223ENST00000472807 CCL26Q9Y258 94 aa9.54□□□□□ -0.88
CHEK2-223ENST00000472807 PTPRDP23468 1912 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 TRAV19A0A0A6YYK7 116 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 TRIM66O15016 1216 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
CHEK2-223ENST00000472807 PHACTR2O75167 634 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 ATP2C2O75185 946 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 TACC1O75410 805 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 TADA3O75528 432 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 MYL1P05976 194 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 CKMP06732 381 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 PDGFRBP09619 1106 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 TDGF1P13385 188 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 PFKFB1P16118 471 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 BDNFP23560 247 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 CMA1P23946 247 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 LMO2P25791 158 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 GNL1P36915 607 aaPredicted RBP9.53□□□□□ -0.88
CHEK2-223ENST00000472807 GRIK1P39086 918 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 ID4P47928 161 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 CXCL12P48061 93 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 PDE6CP51160 858 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 KRT85P78386 507 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 AMPD2Q01433 879 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 BIRC3Q13489 604 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 ZNF268Q14587 947 aaPredicted RBP9.53□□□□□ -0.88
CHEK2-223ENST00000472807 KCNB1Q14721 858 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 PON2Q15165 354 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 PDGFRLQ15198 375 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 WDR72Q3MJ13 1102 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 MDH1BQ5I0G3 518 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 KIAA2013Q8IYS2 634 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 SYNPOQ8N3V7 929 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 TTC16Q8NEE8 873 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 OR6B3Q8NGW1 331 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 SYAP1Q96A49 352 aaPredicted RBP9.53□□□□□ -0.88
CHEK2-223ENST00000472807 EXOC4Q96A65 974 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 PAGE5Q96GU1 130 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 SPATA17Q96L03 361 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 SPATA32Q96LK8 384 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 CRTAC1Q9NQ79 661 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 GKN1Q9NS71 199 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 RBM12Q9NTZ6 932 aaKnown RBP9.53□□□□□ -0.88
CHEK2-223ENST00000472807 EHD2Q9NZN4 543 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 SERTAD1Q9UHV2 236 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 RAB23Q9ULC3 237 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 ATP6V1DQ9Y5K8 247 aa9.53□□□□□ -0.88
CHEK2-223ENST00000472807 A0A1B0GVL5 298 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 KLRC4O43908 158 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 LILRB5O75023 590 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 PAPSS2O95340 614 aaPredicted RBP9.52□□□□□ -0.89
CHEK2-223ENST00000472807 STAU1O95793 577 aaKnown RBP9.52□□□□□ -0.89
CHEK2-223ENST00000472807 FAM163BP0C2L3 166 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 ATICP31939 592 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 AP3M2P53677 418 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 MYL6P60660 151 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 SATB1Q01826 763 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 FAM160A1Q05DH4 1040 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 GRSF1Q12849 480 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHEK2-223ENST00000472807 PSMD2Q13200 908 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 RUNX3Q13761 415 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 CCINQ13939 588 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 MTF1Q14872 753 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 ZNF699Q32M78 642 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 KMT5BQ4FZB7 885 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 Q6ZS52 159 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 DENND5BQ6ZUT9 1274 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 CPA6Q8N4T0 437 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 KIAA0895Q8NCT3 520 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 MYCBPAPQ8TBZ2 947 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 ATP2A3Q93084 1043 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 CCDC47Q96A33 483 aaKnown RBP9.52□□□□□ -0.89
CHEK2-223ENST00000472807 PCED1BQ96HM7 432 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 FAM83CQ9BQN1 747 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 MRPL45Q9BRJ2 306 aaKnown RBP9.52□□□□□ -0.89
CHEK2-223ENST00000472807 ELOVL4Q9GZR5 314 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 EBF3Q9H4W6 596 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
CHEK2-223ENST00000472807 GMEB2Q9UKD1 530 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 GREB1Q4ZG55 1949 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 ATP8B3O60423 1300 aa9.52□□□□□ -0.89
CHEK2-223ENST00000472807 HELZP42694 1942 aaKnown RBP9.51□□□□□ -0.89
CHEK2-223ENST00000472807 ANAPC1Q9H1A4 1944 aa9.51□□□□□ -0.89
CHEK2-223ENST00000472807 A8MXQ7 604 aa9.51□□□□□ -0.89
CHEK2-223ENST00000472807 ATMINO43313 823 aaPredicted RBP9.51□□□□□ -0.89
CHEK2-223ENST00000472807 KIF20AO95235 890 aa9.51□□□□□ -0.89
CHEK2-223ENST00000472807 CST3P01034 146 aaPredicted RBP9.51□□□□□ -0.89
CHEK2-223ENST00000472807 RPN1P04843 607 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms