RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CCDC33Q8N5R6 958 aa6.88□□□□□ -1.31
CLK1-209ENST00000472679 AMER2Q8N7J2 671 aa6.88□□□□□ -1.31
CLK1-209ENST00000472679 SUPT20HQ8NEM7 779 aa6.88□□□□□ -1.31
CLK1-209ENST00000472679 TFAP2BQ92481 460 aa6.88□□□□□ -1.31
CLK1-209ENST00000472679 PPP2R3CQ969Q6 453 aa6.88□□□□□ -1.31
CLK1-209ENST00000472679 PGBD1Q96JS3 809 aa6.88□□□□□ -1.31
CLK1-209ENST00000472679 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
CLK1-209ENST00000472679 LOC102723971A0A1B0GUV8 181 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 TMEM191CA6NGB0 347 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 ADM5C9JUS6 153 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 RAB27BO00194 218 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 AKAP8O43823 692 aaKnown RBP6.87□□□□□ -1.31
CLK1-209ENST00000472679 PLIN1O60240 522 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 ADORA2AP29274 412 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 AVPR1BP47901 424 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 AK2P54819 239 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 NXPH1P58417 271 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 E2F2Q14209 437 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 KIAA0895LQ68EN5 471 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 FCRL6Q6DN72 434 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 ATG4AQ8WYN0 398 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 SLC39A13Q96H72 371 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 RIPOR3Q96MK2 946 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 PPP1R9BQ96SB3 815 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 PRRX2Q99811 253 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 PCGF6Q9BYE7 350 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 TBC1D23Q9NUY8 699 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 ZSCAN32Q9NX65 697 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 DNMT3BQ9UBC3 853 aaKnown RBP6.87□□□□□ -1.31
CLK1-209ENST00000472679 CDY1Q9Y6F8 540 aa6.87□□□□□ -1.31
CLK1-209ENST00000472679 WDR27A2RRH5 827 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 CYR61O00622 381 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 ANXA2P07355 339 aaKnown RBP6.86□□□□□ -1.31
CLK1-209ENST00000472679 BTF3P20290 206 aaKnown RBP6.86□□□□□ -1.31
CLK1-209ENST00000472679 PROZP22891 400 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 ITGA8P53708 1063 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 SATB1Q01826 763 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 UBE4AQ14139 1066 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 PTPRRQ15256 657 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 TBCCQ15814 346 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 TXNRD1Q16881 649 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 RRAGBQ5VZM2 374 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 MAVSQ7Z434 540 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 SLC15A3Q8IY34 581 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 ATP11CQ8NB49 1132 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 TMEM171Q8WVE6 324 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 FKBP10Q96AY3 582 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 GBA2Q9HCG7 927 aaPredicted RBP6.86□□□□□ -1.31
CLK1-209ENST00000472679 KLC4Q9NSK0 619 aa6.86□□□□□ -1.31
CLK1-209ENST00000472679 RASA4BC9J798 803 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 MPPED1O15442 326 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 RASA4O43374 803 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 GCP02774 474 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 TNFSF4P23510 183 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 ACVR2AP27037 513 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 PTDSS1P48651 473 aaKnown RBP6.85□□□□□ -1.31
CLK1-209ENST00000472679 PRKAG1P54619 331 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 MRPS35P82673 323 aaKnown RBP6.85□□□□□ -1.31
CLK1-209ENST00000472679 ARHGEF7Q14155 803 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 SLC29A2Q14542 456 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 DEPDC1Q5TB30 811 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 CACHD1Q5VU97 1274 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 HIBCHQ6NVY1 386 aaPredicted RBP6.85□□□□□ -1.31
CLK1-209ENST00000472679 PCSK4Q6UW60 755 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 RNF44Q7L0R7 432 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 SRLQ86TD4 932 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 DTX2Q86UW9 622 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 YAF2Q8IY57 180 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 GPR150Q8NGU9 434 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 DNAJB14Q8TBM8 379 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 RFKQ969G6 155 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 CCDC138Q96M89 665 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 MYD88Q99836 296 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 TMPRSS5Q9H3S3 457 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 TOR3AQ9H497 397 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 ZNF212Q9UDV6 495 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 RGS17Q9UGC6 210 aaPredicted RBP6.85□□□□□ -1.31
CLK1-209ENST00000472679 PACSIN3Q9UKS6 424 aa6.85□□□□□ -1.31
CLK1-209ENST00000472679 A0A087X1B8 175 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 RRP9O43818 475 aaKnown RBP6.84□□□□□ -1.31
CLK1-209ENST00000472679 RAMP2O60895 175 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 RASAL1O95294 804 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 A1BGP04217 495 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 ELFN1P0C7U0 828 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 FGFR2P21802 821 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 IL1R2P27930 398 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 SERPINB3P29508 390 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 MAPK10P53779 464 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 DPTQ07507 201 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 PMS2P11Q13670 270 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 LY6KQ17RY6 165 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 INSCQ1MX18 579 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 FAM209BQ5JX69 171 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 KAZNQ674X7 775 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 MRGPRGQ86SM5 289 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 DPP9Q86TI2 863 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 IQCDQ96DY2 449 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 STARD7Q9NQZ5 370 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 FOXJ2Q9P0K8 574 aa6.84□□□□□ -1.31
CLK1-209ENST00000472679 SNX14Q9Y5W7 946 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms