RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 INSRRP14616 1297 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 ZSCAN20P17040 1043 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 SFPQP23246 707 aaKnown RBP eCLIP3.94□□□□□ -1.78
XRN1-209ENST00000472625 MARK3P27448 753 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 GNA11P29992 359 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 CD52P31358 61 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 LTBRP36941 435 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 MC3RP41968 323 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 MTHFRP42898 656 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 NRIP1P48552 1158 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 RAB27AP51159 221 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 ADCY7P51828 1080 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 NAPAP54920 295 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 IGBP1P78318 339 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 PRR5P85299 388 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 ZXDAP98168 799 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SMC1AQ14683 1233 aaKnown RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 NONOQ15233 471 aaKnown RBP eCLIP3.94□□□□□ -1.78
XRN1-209ENST00000472625 CLUL1Q15846 466 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 PTPN21Q16825 1174 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 DUSP6Q16828 381 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TCTN1Q2MV58 587 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TTC22Q5TAA0 569 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 BICRALQ6AI39 1079 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 POMZP3Q6PJE2 187 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 USP17L6PQ6QN14 398 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TMEM184AQ6ZMB5 413 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TMTC3Q6ZXV5 915 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SGMS1Q86VZ5 419 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 MICU3Q86XE3 530 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TMEM151BQ8IW70 566 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 CKAP2LQ8IYA6 745 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 MB21D2Q8IYB1 491 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 EXOC8Q8IYI6 725 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 FAM177A1Q8N128 213 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 TDRD5Q8NAT2 981 aaKnown RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 TP53I13Q8NBR0 393 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 ST13P5Q8NFI4 369 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 CCDC148Q8NFR7 591 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SPPL3Q8TCT6 385 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 MRPS27Q92552 414 aaKnown RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 TSPAN17Q96FV3 270 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TMEM169Q96HH4 297 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SNX27Q96L92 541 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 PWWP2AQ96N64 755 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 ZNF558Q96NG5 402 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SCLT1Q96NL6 688 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TCF25Q9BQ70 676 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 JPH2Q9BR39 696 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 MXRA8Q9BRK3 442 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 CELF4Q9BZC1 486 aaKnown RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 C22orf23Q9BZE7 217 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 INO80BQ9C086 356 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 TMEM117Q9H0C3 514 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 MFSD1Q9H3U5 465 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 LY9Q9HBG7 655 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 RIC8AQ9NPQ8 531 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 RGS18Q9NS28 235 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 KCNH7Q9NS40 1196 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 RTEL1Q9NZ71 1219 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.94□□□□□ -1.78
XRN1-209ENST00000472625 PADI3Q9ULW8 664 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SORCS3Q9UPU3 1222 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SSX2IPQ9Y2D8 614 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 USP15Q9Y4E8 981 aaPredicted RBP3.94□□□□□ -1.78
XRN1-209ENST00000472625 UBIAD1Q9Y5Z9 338 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 X6R8D5 127 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 MYO9BQ13459 2157 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 CFAP54Q96N23 3096 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 SCN5AQ14524 2016 aa3.94□□□□□ -1.78
XRN1-209ENST00000472625 TRIOO75962 3097 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 KIAA1217Q5T5P2 1943 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 GSTTP1A0A1W2PQM5 241 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ESYT2A0FGR8 921 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 TBKBP1A7MCY6 615 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 IPO5O00410 1097 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 SH2B2O14492 632 aaPredicted RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 ABLIM1O14639 778 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ZBTB43O43298 467 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 DKC1O60832 514 aaKnown RBP eCLIP3.93□□□□□ -1.78
XRN1-209ENST00000472625 NTRK1P04629 796 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SNRPB2P08579 225 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 LINC00271P0C7V0 271 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 FPR2P25090 351 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 CHMLP26374 656 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SFNP31947 248 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 SREBF1P36956 1147 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ECI1P42126 302 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 ALDH7A1P49419 539 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 DNM2P50570 870 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 CRYBB1P53674 252 aaPredicted RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 POLGP54098 1239 aaPredicted RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 ACTR2P61160 394 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 AKAP17AQ02040 695 aaKnown RBP3.93□□□□□ -1.78
XRN1-209ENST00000472625 CREMQ03060 361 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 MAP4K2Q12851 820 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 NR1I3Q14994 352 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 PLCB4Q15147 1175 aa3.93□□□□□ -1.78
XRN1-209ENST00000472625 PCBP1Q15365 356 aaKnown RBP eCLIP3.93□□□□□ -1.78
XRN1-209ENST00000472625 VWA3BQ502W6 1294 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms