RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 LRG1P02750 347 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 PRKCIP41743 596 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 NRIP1P48552 1158 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 BCAT1P54687 386 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 BST2Q10589 180 aaKnown RBP11.14□□□□□ -0.63
UBE2F-220ENST00000472479 GRIN2CQ14957 1233 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 VEPH1Q14D04 833 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 SPA17Q15506 151 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 CCDC142Q17RM4 750 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 CCDC122Q5T0U0 273 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 DENND1BQ6P3S1 775 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 LCLAT1Q6UWP7 414 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 CCDC149Q6ZUS6 474 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 ZNF571Q7Z3V5 609 aaPredicted RBP11.14□□□□□ -0.63
UBE2F-220ENST00000472479 FUKQ8N0W3 1084 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 ELMOD1Q8N336 334 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 ANKRD52Q8NB46 1076 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 KREMEN2Q8NCW0 462 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 CCDC112Q8NEF3 446 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 FUBP3Q96I24 572 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE2F-220ENST00000472479 CHP1Q99653 195 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 DUSP16Q9BY84 665 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 LRRC4Q9HBW1 653 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 LUC7LQ9NQ29 371 aaKnown RBP11.14□□□□□ -0.63
UBE2F-220ENST00000472479 ADAMTS1Q9UHI8 967 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE2F-220ENST00000472479 IRAK3Q9Y616 596 aa11.14□□□□□ -0.63
UBE2F-220ENST00000472479 TRIM66O15016 1216 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 TGM5O43548 720 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 LILRB3O75022 631 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 PLEKP08567 350 aaPredicted RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 SRGAP2BP0DMP2 458 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 ATF2P15336 505 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 NPR3P17342 541 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 NSFP46459 744 aaKnown RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 RGS7P49802 495 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 PDE4CQ08493 712 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 DDR2Q16832 855 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 PPM1LQ5SGD2 360 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 NAA35Q5VZE5 725 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 ERICH1Q86X53 443 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 IPO4Q8TEX9 1081 aaKnown RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 GIPC2Q8TF65 315 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 CPA5Q8WXQ8 436 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 SECISBP2LQ93073 1101 aaKnown RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 RHOBTB2Q9BYZ6 727 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 NSUN3Q9H649 340 aaKnown RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 DMAP1Q9NPF5 467 aaPredicted RBP11.13□□□□□ -0.63
UBE2F-220ENST00000472479 ARHGAP20Q9P2F6 1191 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 MAFFQ9ULX9 164 aa11.13□□□□□ -0.63
UBE2F-220ENST00000472479 SSU72P8A0A1W2PR75 194 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 F8VP50 259 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PIK3R2O00459 728 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SOX1O00570 391 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CLASP2O75122 1294 aaKnown RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ABLIM3O94929 683 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SETSIPP0DME0 302 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 HAPLN1P10915 354 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 LCP1P13796 627 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 EPHB3P54753 998 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CDK17Q00537 523 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PLD1Q13393 1074 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CAMK1Q14012 370 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 MEA1Q16626 185 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SDHAF4Q5VUM1 108 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PPP1R2P3Q6NXS1 205 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 WDR59Q6PJI9 974 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SIX6OS1Q8N1H7 587 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PDLIM2Q96JY6 352 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PPP1R9BQ96SB3 815 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 KCNK16Q96T55 309 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 MIS12Q9H081 205 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 LHX5Q9H2C1 402 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 TTYH1Q9H313 450 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PIDD1Q9HB75 910 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ABCB6Q9NP58 842 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 NOCTQ9UK39 431 aaKnown RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 MAGED2Q9UNF1 606 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SOWAHDA6NJG2 315 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SOAT2O75908 522 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 LSM8O95777 96 aaKnown RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 C8AP07357 584 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CFHP08603 1231 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CHRNB2P17787 502 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 MAGEA11P43364 429 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ACADSBP45954 432 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CLCN4P51793 760 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 KIF11P52732 1056 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 FMO1Q01740 532 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 GFPT1Q06210 699 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 TWF1Q12792 350 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms