RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	MAP3K7CL	P57077	242 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	CREM	Q03060	361 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	CENPC	Q03188	943 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	UBE3A	Q05086	875 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PDE4C	Q08493	712 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SMARCB1	Q12824	385 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	GPR17	Q13304	367 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	GPM6B	Q13491	265 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PKDCC	Q504Y2	493 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PPP2R2D	Q66LE6	453 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SLC8B1	Q6J4K2	584 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SPRED2	Q7Z698	418 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	FAM35A	Q86V20	835 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	ZSCAN30	Q86W11	494 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	MSANTD4	Q8NCY6	345 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	KIAA1524	Q8TCG1	905 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SLC35F5	Q8WV83	523 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	POF1B	Q8WVV4	589 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SMARCD1	Q96GM5	515 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PPP1R13B	Q96KQ4	1090 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PGLYRP2	Q96PD5	576 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	CLSTN3	Q9BQT9	956 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PACSIN1	Q9BY11	444 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SYNC	Q9H7C4	482 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	CERS4	Q9HA82	394 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	SLC28A3	Q9HAS3	691 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	ENTPD7	Q9NQZ7	604 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	ST7	Q9NRC1	585 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	KRT82	Q9NSB4	513 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	ABI2	Q9NYB9	513 aa	Predicted RBP	11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	ADAM22	Q9P0K1	906 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	INTU	Q9ULD6	942 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PCDHB5	Q9Y5E4	795 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	PLXNA4	Q9HCM2	1894 aa		11.14	□□□□□ -0.63
PUM1-208	ENST00000471894	TULP2	O00295	520 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	XPO1	O14980	1071 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	ADAM12	O43184	909 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	LILRB3	O75022	631 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	CSPG5	O95196	566 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	NPR3	P17342	541 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	CYP2F1	P24903	491 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	MSN	P26038	577 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	GRIK1	P39086	918 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	RGS7	P49802	495 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	SNX16	P57768	344 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	ERVFC1	P60507	584 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	GPC5	P78333	572 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	KIF5A	Q12840	1032 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	PTPN14	Q15678	1187 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	LIN9	Q5TKA1	542 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	PMF1	Q6P1K2	205 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	RNF19B	Q6ZMZ0	732 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	PHF13	Q86YI8	300 aa	Predicted RBP	11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	SCN4B	Q8IWT1	228 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	MCOLN2	Q8IZK6	566 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	CCAR2	Q8N163	923 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	ATAD1	Q8NBU5	361 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	C2orf15	Q8WU43	125 aa	Known RBP	11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	C18orf8	Q96DM3	657 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	TRIM11	Q96F44	468 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	VCPIP1	Q96JH7	1222 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	TCF25	Q9BQ70	676 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	C11orf70	Q9BRQ4	267 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	RHOBTB2	Q9BYZ6	727 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	RXFP1	Q9HBX9	757 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	TLR9	Q9NR96	1032 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	FNIP2	Q9P278	1114 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	MYO1A	Q9UBC5	1043 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	CYTH4	Q9UIA0	394 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894	TFR2	Q9UP52	801 aa		11.13	□□□□□ -0.63
PUM1-208	ENST00000471894		A0A0U1RQJ8	604 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	WDR27	A2RRH5	827 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	MTMR11	A4FU01	709 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	RCCD1	A6NED2	376 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894		H3BNC9	293 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	PIK3R2	O00459	728 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	GRM6	O15303	877 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	KRT86	O43790	486 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	BEST1	O76090	585 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	CALB1	P05937	261 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	CNP	P09543	421 aa	Known RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	TMEM253	P0C7T8	217 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	MYBL1	P10243	752 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	MMP8	P22894	467 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	DNAJB1	P25685	340 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ACADSB	P45954	432 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	PLA2G4A	P47712	749 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	NDUFV1	P49821	464 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	SMAD3	P84022	425 aa	Known RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ROR1	Q01973	937 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ADCY1	Q08828	1119 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	DUSP4	Q13115	394 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	PDCL	Q13371	301 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	RAB33A	Q14088	237 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	SMC1A	Q14683	1233 aa	Known RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms