RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 C16orf70Q9BSU1 422 aa11.17□□□□□ -0.62
APLF-204ENST00000471727 FHDC1Q9C0D6 1143 aaPredicted RBP11.17□□□□□ -0.62
APLF-204ENST00000471727 SDCBP2Q9H190 292 aa11.17□□□□□ -0.62
APLF-204ENST00000471727 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
APLF-204ENST00000471727 SMYD3Q9H7B4 428 aa11.17□□□□□ -0.62
APLF-204ENST00000471727 SAYSD1Q9NPB0 183 aa11.17□□□□□ -0.62
APLF-204ENST00000471727 METTL5Q9NRN9 209 aaKnown RBP11.17□□□□□ -0.62
APLF-204ENST00000471727 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
APLF-204ENST00000471727 NAALADL1Q9UQQ1 740 aa11.17□□□□□ -0.62
APLF-204ENST00000471727 SBF1O95248 1867 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 ANKRD65E5RJM6 399 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 M0QYV0 167 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 TSPAN1O60635 241 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 CST8O60676 142 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 ENDOD1O94919 500 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 GSTA1P08263 222 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 VIMP08670 466 aaKnown RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 TCF4P15884 667 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 GPD1P21695 349 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 RAP1GAPP47736 663 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 CDH8P55286 799 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 ARL4CP56559 192 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 CBLBQ13191 982 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 PDK2Q15119 407 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 DGKDQ16760 1214 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 DUSP28Q4G0W2 176 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 BOLA3Q53S33 107 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 ZC3H12AQ5D1E8 599 aaKnown RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 PNMA8AQ86V59 439 aaPredicted RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 UNC93AQ86WB7 457 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 CDR2LQ86X02 465 aaPredicted RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 CCDC13Q8IYE1 715 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 LRRC34Q8IZ02 419 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 MAK16Q9BXY0 300 aaKnown RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 FRMD8Q9BZ67 464 aaPredicted RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 ABHD16BQ9H3Z7 469 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 KCNK9Q9NPC2 374 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 KLHL11Q9NVR0 708 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 EURLQ9NYK6 297 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 CYTH4Q9UIA0 394 aa11.16□□□□□ -0.62
APLF-204ENST00000471727 SMG5Q9UPR3 1016 aaKnown RBP11.16□□□□□ -0.62
APLF-204ENST00000471727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 EXOC1LA0A1B0GW35 172 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 CCT8L1PA6NM43 557 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 ZNF487B1APH4 448 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 PDHXO00330 501 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 DPYSL4O14531 572 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 MCF2LO15068 1137 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 TOMM70O94826 608 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 ERBB2P04626 1255 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 PECAM1P16284 738 aaPredicted RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 ATP2A2P16615 1042 aaKnown RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 MIPP30301 263 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 AXLP30530 894 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 GJA5P36382 358 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 FKBP1BP68106 108 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 IL9RQ01113 521 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 OTUD4Q01804 1114 aaKnown RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 GRIK4Q16099 956 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 UBAP2Q5T6F2 1119 aaKnown RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 TXNRD3NBQ6F5E7 133 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 VSTM1Q6UX27 236 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 C4orf22Q6V702 233 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 RFX6Q8HWS3 928 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 CNPY4Q8N129 248 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 ARFGAP1Q8N6T3 406 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 LRRC52Q8N7C0 313 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 GBP7Q8N8V2 638 aaPredicted RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 MAML1Q92585 1016 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 ZNF668Q96K58 619 aaPredicted RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 C9orf72Q96LT7 481 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 MAGEB18Q96M61 343 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 TBCBQ99426 244 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 ZWILCHQ9H900 591 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 CYLDQ9NQC7 956 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 USP18Q9UMW8 372 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
APLF-204ENST00000471727 CAPN7Q9Y6W3 813 aa11.15□□□□□ -0.62
APLF-204ENST00000471727 CFAP69A5D8W1 941 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 PRPF4O43172 522 aaKnown RBP eCLIP11.14□□□□□ -0.63
APLF-204ENST00000471727 XPOTO43592 962 aaKnown RBP11.14□□□□□ -0.63
APLF-204ENST00000471727 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
APLF-204ENST00000471727 SUN1O94901 812 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 VTNP04004 478 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 CYP2C8P10632 490 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 IL1R2P27930 398 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 STX2P32856 288 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 SCNN1AP37088 669 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 NDST1P52848 882 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 HIF1AQ16665 826 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 KLHL38Q2WGJ6 581 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 FAM102AQ5T9C2 384 aaPredicted RBP11.14□□□□□ -0.63
APLF-204ENST00000471727 DPP9Q86TI2 863 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 KIAA0319LQ8IZA0 1049 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 ATP11CQ8NB49 1132 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms