RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 BPIFA3Q9BQP9 254 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 MED10Q9BTT4 135 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 NDST4Q9H3R1 872 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 ZNF334Q9HCZ1 680 aaPredicted RBP16.24■□□□□ 0.19
SDC3-203ENST00000471567 EHD2Q9NZN4 543 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 GCNT4Q9P109 453 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 VCANP13611 3396 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 CUL9Q8IWT3 2517 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 F8VP50 259 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 PI4K2BG5E9Z4 385 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 DCXO43602 365 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 GABRR2P28476 465 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 RAD23BP54727 409 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 EXOC3L4Q17RC7 722 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 HSP90AA4PQ58FG1 418 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 MIIPQ5JXC2 388 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 SDHAF4Q5VUM1 108 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 SMYD5Q6GMV2 418 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 GAREM2Q75VX8 874 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 MTSS1LQ765P7 747 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 PPM1KQ8N3J5 372 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 C12orf29Q8N999 325 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 SLC2A14Q8TDB8 520 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 MCRS1Q96EZ8 462 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 CYFIP2Q96F07 1278 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 HEXIM2Q96MH2 286 aaKnown RBP16.23■□□□□ 0.19
SDC3-203ENST00000471567 GCNAQ96QF7 691 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 ATXN3LQ9H3M9 355 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 KCNK12Q9HB15 430 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 IL21Q9HBE4 155 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 FANCLQ9NW38 375 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 ZMYM5Q9UJ78 669 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 KIAA1257Q9ULG3 409 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 SORCS3Q9UPU3 1222 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 PTPRDP23468 1912 aa16.23■□□□□ 0.19
SDC3-203ENST00000471567 A0A1W2PRU2 124 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 SOBPA7XYQ1 873 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 F11P03951 625 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 CCDC130P13994 396 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 TEAD2Q15562 447 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 ANO6Q4KMQ2 910 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 ZNF394Q53GI3 561 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 ARHGAP15Q53QZ3 475 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 PHLDB3Q6NSJ2 640 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 TRIM65Q6PJ69 517 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 DENND5BQ6ZUT9 1274 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 ENOSF1Q7L5Y1 443 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 ARHGEF19Q8IW93 802 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 KHSRPQ92945 711 aaKnown RBP eCLIP16.22■□□□□ 0.19
SDC3-203ENST00000471567 CRACR2AQ9BSW2 395 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 FUCA2Q9BTY2 467 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 CSNK1G1Q9HCP0 422 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 DMAP1Q9NPF5 467 aaPredicted RBP16.22■□□□□ 0.19
SDC3-203ENST00000471567 FAM49BQ9NUQ9 324 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 MUTYHQ9UIF7 546 aa16.22■□□□□ 0.19
SDC3-203ENST00000471567 MAGED2Q9UNF1 606 aaPredicted RBP16.22■□□□□ 0.19
SDC3-203ENST00000471567 SMTNL1A8MU46 457 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 NRG2O14511 850 aaPredicted RBP16.21■□□□□ 0.19
SDC3-203ENST00000471567 AP1G2O75843 785 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 ASGR2P07307 311 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 TPM2P07951 284 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 FAM200BP0CF97 657 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 GJA1P17302 382 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 SLC9A1P19634 815 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 ACO1P21399 889 aaKnown RBP16.21■□□□□ 0.19
SDC3-203ENST00000471567 DDX6P26196 483 aaKnown RBP eCLIP16.21■□□□□ 0.19
SDC3-203ENST00000471567 PON1P27169 355 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 CACNA2D1P54289 1103 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 TDGQ13569 410 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 HTR4Q13639 388 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 NCAPHQ15003 741 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 RRAGAQ7L523 313 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 ANKRD20A12PQ8NF67 263 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 TTLL2Q9BWV7 592 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 KRT82Q9NSB4 513 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 TMEM30AQ9NV96 361 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 COMMD8Q9NX08 183 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 PCDHB4Q9Y5E5 795 aa16.21■□□□□ 0.19
SDC3-203ENST00000471567 MYO10Q9HD67 2058 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 SYCE3A1L190 88 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 ECI2O75521 394 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 RTN3O95197 1032 aaPredicted RBP16.2■□□□□ 0.18
SDC3-203ENST00000471567 PAEPP09466 180 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 ADORA2BP29275 332 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 WEE1P30291 646 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 PPP3CCP48454 512 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 MFAP3P55082 362 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 ZXDAP98168 799 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 KRT31Q15323 416 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 PPP1R26Q5T8A7 1209 aaPredicted RBP16.2■□□□□ 0.18
SDC3-203ENST00000471567 POTEHQ6S545 545 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 TMEM270Q6UE05 265 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 PARM1Q6UWI2 310 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 TMEM150AQ86TG1 271 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 UBALD2Q8IYN6 164 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 NUP93Q8N1F7 819 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms