RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 CSH2P0DML3 217 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 RAP1GAPP47736 663 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 LHX1P48742 406 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 PGFP49763 221 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 DLG4P78352 724 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 MESP2Q0VG99 397 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 ZNF77Q15935 545 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 TAF12Q16514 161 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 RSPO4Q2I0M5 234 aaPredicted RBP10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 ITPRIPL2Q3MIP1 535 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 TMEM196Q5HYL7 178 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 HEATR6Q6AI08 1181 aaKnown RBP10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 DPH6Q7L8W6 267 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 SPATA2LQ8IUW3 424 aaPredicted RBP10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 SFTPA1Q8IWL2 248 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 TRMT2BQ96GJ1 504 aaKnown RBP10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 ANKRD36BP1Q96IX9 119 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 B3GNT5Q9BYG0 378 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 CUEDC2Q9H467 287 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 ABCB6Q9NP58 842 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 DMAC2Q9NW81 257 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 DLL3Q9NYJ7 618 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 WNT6Q9Y6F9 365 aa10.46□□□□□ -0.73
RPRD1B-204ENST00000471511 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.74
RPRD1B-204ENST00000471511 A0A1B0GVL5 298 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 LRRIQ3A6PVS8 624 aaPredicted RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 TRDMT1O14717 391 aaKnown RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 KIAA0391O15091 583 aaKnown RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 PAPSS2O95340 614 aaPredicted RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 TNNC2P02585 160 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 C4BPAP04003 597 aaKnown RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 GJA4P35212 333 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 GNL1P36915 607 aaPredicted RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 MAGEA11P43364 429 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 ME1P48163 572 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 CCR3P51677 355 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 EML3Q32P44 896 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 TDRD10Q5VZ19 366 aaKnown RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 C12orf56Q8IXR9 622 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 XXYLT1Q8NBI6 393 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 MYCBPAPQ8TBZ2 947 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 MRPS31Q92665 395 aaKnown RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 WBP2Q969T9 261 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 MMS19Q96T76 1030 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 HINFPQ9BQA5 517 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 ZNF518BQ9C0D4 1074 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 KCTD10Q9H3F6 313 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 SMYD3Q9H7B4 428 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 TRPC7Q9HCX4 862 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 MAGEC2Q9UBF1 373 aaPredicted RBP10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 CDH9Q9ULB4 789 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 HPSEQ9Y251 543 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 SPTBN2O15020 2390 aa10.45□□□□□ -0.74
RPRD1B-204ENST00000471511 PVALEFA0A1B0GWK0 134 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 F8VP50 259 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 TACC1O75410 805 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 SLFN14P0C7P3 912 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 PFKFB1P16118 471 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 PTPN1P18031 435 aaKnown RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 TNNI1P19237 187 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 PCSK1P29120 753 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 AVPR1AP37288 418 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 ATXN1P54253 815 aaKnown RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 RPL10AP62906 217 aaKnown RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 PLCB2Q00722 1185 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 CYP27A1Q02318 531 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 SPEM2Q0P670 501 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 MYO1EQ12965 1108 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 USP4Q13107 963 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 ORC1Q13415 861 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 ZNF268Q14587 947 aaPredicted RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 MTF1Q14872 753 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 KNOP1Q1ED39 458 aaKnown RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 WDR72Q3MJ13 1102 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 DGKKQ5KSL6 1271 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 TTC16Q8NEE8 873 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 SPATA18Q8TC71 538 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 SH3RF2Q8TEC5 729 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 PARD3BQ8TEW8 1205 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 FUBP3Q96I24 572 aaKnown RBP eCLIP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 SPATA17Q96L03 361 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 GCNAQ96QF7 691 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 KCNK16Q96T55 309 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 TTLL2Q9BWV7 592 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 LRRC27Q9C0I9 530 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 ECT2Q9H8V3 914 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 NCDNQ9UBB6 729 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 ATG2BQ96BY7 2078 aa10.44□□□□□ -0.74
RPRD1B-204ENST00000471511 GREB1Q4ZG55 1949 aa10.43□□□□□ -0.74
RPRD1B-204ENST00000471511 ANAPC1Q9H1A4 1944 aa10.43□□□□□ -0.74
RPRD1B-204ENST00000471511 ZNF840PA6NDX5 716 aa10.43□□□□□ -0.74
RPRD1B-204ENST00000471511 GDF9O60383 454 aa10.43□□□□□ -0.74
RPRD1B-204ENST00000471511 RNF40O75150 1001 aa10.43□□□□□ -0.74
RPRD1B-204ENST00000471511 BEST1O76090 585 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms