RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 LTA4HP09960 611 aaKnown RBP5.03□□□□□ -1.6
VPS13A-210ENST00000471439 MTHFD2P13995 350 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 CTSSP25774 331 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 HMGA2P52926 109 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 PPP3CAQ08209 521 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 MRPL49Q13405 166 aaKnown RBP5.03□□□□□ -1.6
VPS13A-210ENST00000471439 CCDC178Q5BJE1 867 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 MFSD5Q6N075 450 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 Q6ZPA2 131 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 USP51Q70EK9 711 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 CATIPQ7Z7H3 387 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 NBPF5PQ86XG9 351 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-210ENST00000471439 FAM43AQ8N2R8 423 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 GLB1L3Q8NCI6 653 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-210ENST00000471439 REPS2Q8NFH8 660 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 OR2I1PQ8NGU4 316 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 MDM1Q8TC05 714 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 HERVK_113Q902F9 699 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 HSPBAP1Q96EW2 488 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 CEP95Q96GE4 821 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 LRGUKQ96M69 825 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 ANLNQ9NQW6 1124 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 AURKAIP1Q9NWT8 199 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-210ENST00000471439 TRPS1Q9UHF7 1281 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 GABRQQ9UN88 632 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 COG5Q9UP83 839 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 SORCS3Q9UPU3 1222 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 DSPP15924 2871 aaKnown RBP5.03□□□□□ -1.6
VPS13A-210ENST00000471439 NCAPD2Q15021 1401 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 CEP295Q9C0D2 2601 aa5.03□□□□□ -1.6
VPS13A-210ENST00000471439 MYO9AB2RTY4 2548 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-210ENST00000471439 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-210ENST00000471439 LEFTY2O00292 366 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 MFAP3LO75121 409 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 RFPL1O75677 317 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 CT47B1P0C2W7 299 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-210ENST00000471439 EDNRBP24530 442 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 RPS12P25398 132 aaKnown RBP5.02□□□□□ -1.61
VPS13A-210ENST00000471439 GZMKP49863 264 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 SLC5A3P53794 718 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 FAM189BP81408 668 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 MALLQ13021 153 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 ZNF267Q14586 743 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-210ENST00000471439 RABL3Q5HYI8 236 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 FAM102BQ5T8I3 360 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 APBB1IPQ7Z5R6 666 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-210ENST00000471439 SYT12Q8IV01 421 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 MYO1HQ8N1T3 1032 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 RNF169Q8NCN4 708 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 OR52N2Q8NGI0 321 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 NRG4Q8WWG1 115 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 RSAD2Q8WXG1 361 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 BRI3BPQ8WY22 251 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS13A-210ENST00000471439 LIMCH1Q9UPQ0 1083 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 ANKRD6Q9Y2G4 727 aa5.02□□□□□ -1.61
VPS13A-210ENST00000471439 GBF1Q92538 1859 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 KRT4P19013 534 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-210ENST00000471439 MCM7P33993 719 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 MCAMP43121 646 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 MLC1Q15049 377 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 UAP1L1Q3KQV9 507 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 C3orf36Q3SXR2 165 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 MFSD14BQ5SR56 506 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 PRAMEF14Q5SWL7 426 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 NAIF1Q69YI7 327 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-210ENST00000471439 BTNL9Q6UXG8 535 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 EPM2AIP1Q7L775 607 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-210ENST00000471439 TCEAL8Q8IYN2 117 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 MAGEB6Q8N7X4 407 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 CPT1CQ8TCG5 803 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 SNX33Q8WV41 574 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 SSH1Q8WYL5 1049 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 BADQ92934 168 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 RAB24Q969Q5 203 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 COA7Q96BR5 231 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 FSD1Q9BTV5 496 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 MLST8Q9BVC4 326 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 TEX101Q9BY14 249 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 GTPBP4Q9BZE4 634 aaKnown RBP5.01□□□□□ -1.61
VPS13A-210ENST00000471439 NRDE2Q9H7Z3 1164 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 DLL3Q9NYJ7 618 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 DNM3Q9UQ16 869 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 A0A1W2PP64 1363 aa5.01□□□□□ -1.61
VPS13A-210ENST00000471439 SCN9AQ15858 1988 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 SPTAN1Q13813 2472 aaKnown RBP5□□□□□ -1.61
VPS13A-210ENST00000471439 GOLGA6L6A8MZA4 724 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 AHRRA9YTQ3 701 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 ADH4P08319 380 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 MYBP10242 640 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 GYPEP15421 78 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 LPOP22079 712 aaPredicted RBP5□□□□□ -1.61
VPS13A-210ENST00000471439 ADSLP30566 484 aaPredicted RBP5□□□□□ -1.61
VPS13A-210ENST00000471439 NBL1P41271 181 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 ADKP55263 362 aaKnown RBP5□□□□□ -1.61
VPS13A-210ENST00000471439 WNT3AP56704 352 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 APBA1Q02410 837 aa5□□□□□ -1.61
VPS13A-210ENST00000471439 SEPT2Q15019 361 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms