RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TARSL2A2RTX5 802 aaKnown RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 GOLGA8SH3BPF8 625 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CCDC188H7C350 402 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 XPO1O14980 1071 aaKnown RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 DDHD2O94830 711 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 TUBBP07437 444 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CLTBP09497 229 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 ACAT1P24752 427 aaKnown RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 ADORA2BP29275 332 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CYP2C18P33260 490 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 SCNN1AP37088 669 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 ACADSBP45954 432 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 BRCC3P46736 316 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 VASPP50552 380 aaPredicted RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 LBX1P52954 281 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CCL23P55773 120 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 SLC8A3P57103 927 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 OGDHQ02218 1023 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 PAN2Q504Q3 1202 aaKnown RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 FAM102AQ5T9C2 384 aaPredicted RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 SEL1L2Q5TEA6 688 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 LRRC38Q5VT99 294 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CCDC70Q6NSX1 233 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 PMF1Q6P1K2 205 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CNKSR3Q6P9H4 555 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 FAM183BPQ6ZVS7 135 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 ZNF280BQ86YH2 543 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 NPAS4Q8IUM7 802 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 RHOT1Q8IXI2 618 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 RUBCNQ92622 972 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 HSFY1Q96LI6 401 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CASD1Q96PB1 797 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 LPIN3Q9BQK8 851 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 RTP3Q9BQQ7 232 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 ACBD6Q9BR61 282 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 PLVAPQ9BX97 442 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 ANKZF1Q9H8Y5 726 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 CRTAC1Q9NQ79 661 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 ST7Q9NRC1 585 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 METTL5Q9NRN9 209 aaKnown RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 RBM12Q9NTZ6 932 aaKnown RBP9.89□□□□□ -0.83
VPS52-216ENST00000471309 LRFN2Q9ULH4 789 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 PCDHB8Q9UN66 801 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 ATP11BQ9Y2G3 1177 aa9.89□□□□□ -0.83
VPS52-216ENST00000471309 FNDC1Q4ZHG4 1894 aaPredicted RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 NLRC5Q86WI3 1866 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 COL4A4P53420 1690 aaPredicted RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 COL4A6Q14031 1691 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 TULP2O00295 520 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 DPYSL4O14531 572 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 ATP2C2O75185 946 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 FGGP02679 453 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 ITGB1P05556 798 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 FAM200BP0CF97 657 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 H2AFXP16104 143 aaPredicted RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 NPR3P17342 541 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 PSMA2P25787 234 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 RFC1P35251 1148 aaPredicted RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 RGS7P49802 495 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 TAS2R40P59535 323 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 ACAP1Q15027 740 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 GLE1Q53GS7 698 aaKnown RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 MDH1BQ5I0G3 518 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 KIAA0319Q5VV43 1072 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 OLFML1Q6UWY5 402 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 POLNQ7Z5Q5 900 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 FAM35AQ86V20 835 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 KATNAL2Q8IYT4 538 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 JOSD2Q8TAC2 188 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 MYCBPAPQ8TBZ2 947 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 KCTD13Q8WZ19 329 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 PAWRQ96IZ0 340 aaKnown RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 FAM193BQ96PV7 902 aaPredicted RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 PKMYT1Q99640 499 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 TMEM175Q9BSA9 504 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 DUSP16Q9BY84 665 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 KRT82Q9NSB4 513 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 TMEM39AQ9NV64 488 aa9.88□□□□□ -0.83
VPS52-216ENST00000471309 TIMM13Q9Y5L4 95 aaPredicted RBP9.88□□□□□ -0.83
VPS52-216ENST00000471309 GOLGA6L10A0A0M3HER8 536 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 C2CD4BA6NLJ0 364 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 I3L4J1 428 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 KRIT1O00522 736 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 PAPSS1O43252 624 aaPredicted RBP9.87□□□□□ -0.83
VPS52-216ENST00000471309 TRAPPC3O43617 180 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 PYGMP11217 842 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 GPD1P21695 349 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 MCM3P25205 808 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 OR1G1P47890 313 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 ZNF143P52747 638 aaPredicted RBP9.87□□□□□ -0.83
VPS52-216ENST00000471309 SLC6A3Q01959 620 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 ZNF211Q13398 564 aaPredicted RBP9.87□□□□□ -0.83
VPS52-216ENST00000471309 IKBKEQ14164 716 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 MAPRE1Q15691 268 aaKnown RBP9.87□□□□□ -0.83
VPS52-216ENST00000471309 PPP2R5EQ16537 467 aa9.87□□□□□ -0.83
VPS52-216ENST00000471309 CCDC142Q17RM4 750 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms