RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 TMEM176AQ96HP8 235 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 ADAM2Q99965 735 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 RSAD1Q9HA92 442 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 SEPT11Q9NVA2 429 aaKnown RBP9.7□□□□□ -0.86
PTPRE-207ENST00000471218 WDR35Q9P2L0 1181 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 DSEQ9UL01 958 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 GRID2IPA4D2P6 1211 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ARL5CA6NH57 179 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 KPNA7A9QM74 516 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 C9IYK1 514 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 TMEM189-UBE2V1I3L0A0 370 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 CITO14578 2027 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 PTGESO14684 152 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 THAP12O43422 761 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 GFRA3O60609 400 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MMEP08473 750 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ANK1P16157 1881 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MMP8P22894 467 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 WARSP23381 471 aaKnown RBP9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MAN1A1P33908 653 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 SCNN1AP37088 669 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MTHFRP42898 656 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 SLC1A1P43005 524 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 RAD23BP54727 409 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MTMR3Q13615 1198 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MEI1Q5TIA1 1274 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ARHGAP17Q68EM7 881 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ANKRD54Q6NXT1 300 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 LCLAT1Q6UWP7 414 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 GLB1LQ6UWU2 654 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MON1BQ7L1V2 547 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 TMC7Q7Z402 723 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ADGRD2Q7Z7M1 963 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ECHDC2Q86YB7 292 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MCOLN2Q8IZK6 566 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 CRYBG2Q8N1P7 616 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 LRRC43Q8N309 656 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 COLGALT1Q8NBJ5 622 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 PRSS33Q8NF86 280 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 LINC01599Q8WXQ3 324 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 RUBCNQ92622 972 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 PBKQ96KB5 322 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 TNIP3Q96KP6 325 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 RIPOR3Q96MK2 946 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF558Q96NG5 402 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 PCDHB18PQ96TA0 734 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 MRPL9Q9BYD2 267 aaKnown RBP9.69□□□□□ -0.86
PTPRE-207ENST00000471218 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
PTPRE-207ENST00000471218 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ABCB6Q9NP58 842 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 ENTPD7Q9NQZ7 604 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 SPG21Q9NZD8 308 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 NXF1Q9UBU9 619 aaKnown RBP9.69□□□□□ -0.86
PTPRE-207ENST00000471218 TRIM10Q9UDY6 481 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 TTC7AQ9ULT0 858 aaPredicted RBP9.69□□□□□ -0.86
PTPRE-207ENST00000471218 SORCS3Q9UPU3 1222 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 CAPN6Q9Y6Q1 641 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 DUSP10Q9Y6W6 482 aa9.69□□□□□ -0.86
PTPRE-207ENST00000471218 PROB1E7EW31 1015 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 O00370 1275 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 DYNC1I1O14576 645 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
PTPRE-207ENST00000471218 FSCN2O14926 492 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 PER2O15055 1255 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 FANCGO15287 622 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 HUS1O60921 280 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 CLSTN1O94985 981 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 CSPG5O95196 566 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 MOCS3O95396 460 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 GLP2RO95838 553 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 WEE2P0C1S8 567 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 AKAP5P24588 427 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 LHX1P48742 406 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 ALDH7A1P49419 539 aaKnown RBP9.68□□□□□ -0.86
PTPRE-207ENST00000471218 NAP1L1P55209 391 aaKnown RBP9.68□□□□□ -0.86
PTPRE-207ENST00000471218 LILRA4P59901 499 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 TUSC3Q13454 348 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 SMC1AQ14683 1233 aaKnown RBP9.68□□□□□ -0.86
PTPRE-207ENST00000471218 PPP2R5EQ16537 467 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 SGO2Q562F6 1265 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 IER5LQ5T953 404 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 PLEKHA7Q6IQ23 1121 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 AGMOQ6ZNB7 445 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 PALB2Q86YC2 1186 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 ZDHHC17Q8IUH5 632 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 SLC4A11Q8NBS3 891 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 GSTCDQ8NEC7 633 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 APPL2Q8NEU8 664 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 SLC35G2Q8TBE7 412 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 URGCPQ8TCY9 931 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 WHAMMQ8TF30 809 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 FNIP1Q8TF40 1166 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 ASIC4Q96FT7 647 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 NAP1L3Q99457 506 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-207ENST00000471218 NCAPGQ9BPX3 1015 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 TCF25Q9BQ70 676 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 PACSIN1Q9BY11 444 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 THAP2Q9H0W7 228 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms