RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ANPEPP15144 967 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 POLR2BP30876 1174 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TTKP33981 857 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 SOX5P35711 763 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 KRT2P35908 639 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 LONP1P36776 959 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GRIK1P39086 918 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 STAT1P42224 750 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 SLC1A1P43005 524 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MAPK9P45984 424 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 DGKGP49619 791 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GSK3AP49840 483 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TSPAN5P62079 268 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 EEF1A1P68104 462 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TUBB4BP68371 445 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MRPS5P82675 430 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MAP3K10Q02779 954 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 RELAQ04206 551 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 EEF1A2Q05639 463 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 LGALS3BPQ08380 585 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CDC16Q13042 620 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 HNRNPDQ14103 355 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF423Q2M1K9 1284 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GFOD2Q3B7J2 385 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MINDY4Q4G0A6 757 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 EEF1A1P5Q5VTE0 462 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 RETSATQ6NUM9 610 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CLEC2AQ6UVW9 174 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 LDHAL6AQ6ZMR3 332 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 IDO2Q6ZQW0 420 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CATSPERGQ6ZRH7 1159 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 PIK3AP1Q6ZUJ8 805 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 HDXQ7Z353 690 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GALNTL5Q7Z4T8 443 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 ASPGQ86U10 573 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 KRT73Q86Y46 540 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 DNAAF5Q86Y56 855 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CARFQ8N187 725 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CPSF7Q8N684 471 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TMEM102Q8N9M5 508 aaPredicted RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC63Q8NA47 563 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CNBD1Q8NA66 436 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 ZBTB44Q8NCP5 570 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 DENND6BQ8NEG7 585 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 DDHD1Q8NEL9 900 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 LPCAT1Q8NF37 534 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TTLL11Q8NHH1 800 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CFAP61Q8NHU2 1237 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 FANK1Q8TC84 345 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 SPPL3Q8TCT6 385 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 AFG1LQ8WV93 481 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GJA10Q969M2 543 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 FERMT2Q96AC1 680 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TMIGD2Q96BF3 282 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TUBGCP3Q96CW5 907 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MED15Q96RN5 788 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MPHOSPH8Q99549 860 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CTRCQ99895 268 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 FSD1Q9BTV5 496 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MLPHQ9BV36 600 aaPredicted RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 NOC4LQ9BVI4 516 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TIPINQ9BVW5 301 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CARD6Q9BX69 1037 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 BTBD2Q9BX70 525 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 STK33Q9BYT3 514 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 PBX4Q9BYU1 374 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GCOM2Q9BZD3 368 aaPredicted RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TRIM15Q9C019 465 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 PAIP1Q9H074 479 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 VCXQ9H320 206 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 THAP9Q9H5L6 903 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 STN1Q9H668 368 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TMEM206Q9H813 350 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 VIPAS39Q9H9C1 493 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TUFT1Q9NNX1 390 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 INTS7Q9NVH2 962 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 PAG1Q9NWQ8 432 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 OBP2AQ9NY56 170 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 HSPBP1Q9NZL4 362 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 LARSQ9P2J5 1176 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CD300AQ9UGN4 299 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MOSPD1Q9UJG1 213 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 RCAN3Q9UKA8 241 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GJD2Q9UKL4 321 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 SLC6A14Q9UN76 642 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 DTX4Q9Y2E6 619 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 A0A096LPE4 126 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 PVALEFA0A1B0GWK0 134 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 A0A1W2PPZ6 126 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ARHGEF37A1IGU5 675 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 GOLGA8BA8MQT2 603 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 E7EVH7 732 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 H0YIV9 168 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 H7C0S8 307 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 TRIM77I1YAP6 450 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 HNRNPRO43390 633 aaKnown RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SMAD6O43541 496 aaKnown RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 LRRN2O75325 713 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 CRTAPO75718 401 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 DNAJB5O75953 348 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms