RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 VSTM1Q6UX27 236 aa17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 MAML2Q8IZL2 1156 aaPredicted RBP17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 GUF1Q8N442 669 aaKnown RBP17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 BPIFB1Q8TDL5 484 aa17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 FAM3CQ92520 227 aa17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 USP13Q92995 863 aaPredicted RBP17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 SMYD3Q9H7B4 428 aa17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 VRTNQ9H8Y1 702 aa17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 THG1LQ9NWX6 298 aaKnown RBP17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 CCL26Q9Y258 94 aa17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 NUP210Q8TEM1 1887 aaPredicted RBP17.49■□□□□ 0.39
GTF3C2-209ENST00000470115 PRR23AA6NEV1 266 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 A8MXQ7 604 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 LAMTOR5O43504 91 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 NR2F2P24468 414 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 RAP1GAPP47736 663 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 MLLT6P55198 1093 aaPredicted RBP17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 TNK2Q07912 1038 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 PNOCQ13519 176 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 ZNF667Q5HYK9 610 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 C1orf220Q5T0J3 134 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 FMR1NBQ8N0W7 255 aaPredicted RBP17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 NKD2Q969F2 451 aaPredicted RBP17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 SPATA17Q96L03 361 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 CYP2S1Q96SQ9 504 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 C8orf33Q9H7E9 229 aaPredicted RBP17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 TRPC7Q9HCX4 862 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 GKN1Q9NS71 199 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 GTSE1Q9NYZ3 720 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 R4GN57 208 aa17.48■□□□□ 0.39
GTF3C2-209ENST00000470115 DENND4CQ5VZ89 1909 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 SOBPA7XYQ1 873 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 IKBKBO14920 756 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 MAPK13O15264 365 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 AKAP3O75969 853 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 VAMP7P51809 220 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 USP46P62068 366 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 CSTF1Q05048 431 aaKnown RBP17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 NFIL3Q16649 462 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 SGSM1Q2NKQ1 1148 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 ZACNQ401N2 412 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 SV2AQ7L0J3 742 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 SMYD4Q8IYR2 804 aaPredicted RBP17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 ENGASEQ8NFI3 743 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 CCDC34Q96HJ3 373 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 B3GNT5Q9BYG0 378 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 SDCBP2Q9H190 292 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 LMAN1LQ9HAT1 526 aa17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 RIF1Q5UIP0 2472 aaKnown RBP17.47■□□□□ 0.39
GTF3C2-209ENST00000470115 F8VP50 259 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 SPECC1L-ADORA2AF8WAN1 911 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 CLDN5O00501 218 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 ANXA13P27216 316 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 CACNA2D1P54289 1103 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 MTAPQ13126 283 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 ADAM9Q13443 819 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 DENND5BQ6ZUT9 1274 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 FAM186BQ8IYM0 893 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 B3GALNT2Q8NCR0 500 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 C8orf48Q96LL4 319 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 SLC22A12Q96S37 553 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 ZNF518BQ9C0D4 1074 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 TMEM30AQ9NV96 361 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 FBXO4Q9UKT5 387 aa17.46■□□□□ 0.39
GTF3C2-209ENST00000470115 C2orf78A6NCI8 922 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 TRIM66O15016 1216 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 HLA-DRAP01903 254 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 USP17L7P0C7H9 530 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 TRIM49P0CI25 452 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 TRIM49CP0CI26 452 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 RPL13P26373 211 aaKnown RBP17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 PSMC2P35998 433 aaKnown RBP17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 GCLMP48507 274 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 ZNF268Q14587 947 aaPredicted RBP17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 ITPRIPL2Q3MIP1 535 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 ZCWPW2Q504Y3 356 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 SPOPLQ6IQ16 392 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 TXNDC11Q6PKC3 985 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 RALGPS2Q86X27 583 aaPredicted RBP17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 RIN3Q8TB24 985 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 CEP295NLQ96MC4 621 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 FAM83CQ9BQN1 747 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 CHRDQ9H2X0 955 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 KIF9Q9HAQ2 790 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 OBSL1O75147 1896 aa17.45■□□□□ 0.38
GTF3C2-209ENST00000470115 PTPRZ1P23471 2315 aaPredicted RBP17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 CFAP54Q96N23 3096 aa17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 TRAV19A0A0A6YYK7 116 aa17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 ASS1P00966 412 aaKnown RBP17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 CKMP06732 381 aa17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 CHRNB1P11230 501 aa17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 KRT13P13646 458 aa17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 P4HA1P13674 534 aa17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 CTHP32929 405 aa17.44■□□□□ 0.38
GTF3C2-209ENST00000470115 PIK3CAP42336 1068 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms