RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TIFAQ96CG3 184 aa4.85□□□□□ -1.63
BRCA2-202ENST00000470094 NMD3Q96D46 503 aaKnown RBP4.85□□□□□ -1.63
BRCA2-202ENST00000470094 C8orf48Q96LL4 319 aa4.85□□□□□ -1.63
BRCA2-202ENST00000470094 UROC1Q96N76 676 aa4.85□□□□□ -1.63
BRCA2-202ENST00000470094 CXorf36Q9H7Y0 433 aa4.85□□□□□ -1.63
BRCA2-202ENST00000470094 GLOD4Q9HC38 313 aa4.85□□□□□ -1.63
BRCA2-202ENST00000470094 STK32BQ9NY57 414 aa4.85□□□□□ -1.63
BRCA2-202ENST00000470094 ENTPD2Q9Y5L3 495 aa4.85□□□□□ -1.63
BRCA2-202ENST00000470094 SPATA31A6Q5VVP1 1343 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 MBD3L4A6NDZ8 208 aaPredicted RBP4.84□□□□□ -1.63
BRCA2-202ENST00000470094 MBD3L3A6NE82 208 aaPredicted RBP4.84□□□□□ -1.63
BRCA2-202ENST00000470094 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 KLRC1P26715 233 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 ALDH9A1P49189 494 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 PDE6CP51160 858 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 DGKEP52429 567 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 PRKAG1P54619 331 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 ELLP55199 621 aaPredicted RBP4.84□□□□□ -1.63
BRCA2-202ENST00000470094 FMO1Q01740 532 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 GALEQ14376 348 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 C3orf38Q5JPI3 329 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 TSTD2Q5T7W7 516 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 FBXO42Q6P3S6 717 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 RD3Q7Z3Z2 195 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 MAVSQ7Z434 540 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 MICU3Q86XE3 530 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 PRIMA1Q86XR5 153 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 SLC15A3Q8IY34 581 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
BRCA2-202ENST00000470094 SPSB4Q96A44 273 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 CCDC136Q96JN2 1154 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 HAPLN3Q96S86 360 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 PPP1R9BQ96SB3 815 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 KLK15Q9H2R5 256 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 CPNE5Q9HCH3 593 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 ARHGEF3Q9NR81 526 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 IL17RBQ9NRM6 502 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 SEMA4GQ9NTN9 838 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 ASB6Q9NWX5 421 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 ST3GAL5Q9UNP4 418 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 PCDHGB6Q9Y5F9 930 aa4.84□□□□□ -1.63
BRCA2-202ENST00000470094 PYCARD-AS1I3L0S3 204 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 KIF3BO15066 747 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 RASSF9O75901 435 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 ONECUT2O95948 504 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 ELFN1P0C7U0 828 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 NDUFB7P17568 137 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 GPD1P21695 349 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 CCT8P50990 548 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 CLCN2P51788 898 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 SOX10P56693 466 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 RPS16P62249 146 aaKnown RBP4.83□□□□□ -1.64
BRCA2-202ENST00000470094 SEMA5AQ13591 1074 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 INSCQ1MX18 579 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 ZIK1Q3SY52 487 aaPredicted RBP4.83□□□□□ -1.64
BRCA2-202ENST00000470094 ZNF362Q5T0B9 420 aaPredicted RBP4.83□□□□□ -1.64
BRCA2-202ENST00000470094 TREML2Q5T2D2 321 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 DEPDC1Q5TB30 811 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 CYB5RLQ6IPT4 315 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 OR56A3Q8NH54 315 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 BPIFB1Q8TDL5 484 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 OSCP1Q8WVF1 389 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 GLG1Q92896 1179 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 TIMP4Q99727 224 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 STK31Q9BXU1 1019 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 NUP62CLQ9H1M0 184 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 PRDM13Q9H4Q3 707 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 SERTAD4Q9NUC0 356 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 TRMT13Q9NUP7 481 aaKnown RBP4.83□□□□□ -1.64
BRCA2-202ENST00000470094 SH2B3Q9UQQ2 575 aa4.83□□□□□ -1.64
BRCA2-202ENST00000470094 LOC102723971A0A1B0GUV8 181 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 IGLV2-14P01704 120 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 FESP07332 822 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 CSF1RP07333 972 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 IL6RP08887 468 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-202ENST00000470094 RPL17P18621 184 aaKnown RBP4.82□□□□□ -1.64
BRCA2-202ENST00000470094 WT1P19544 449 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-202ENST00000470094 KCNA3P22001 575 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 LIPAP38571 399 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 ATXN1P54253 815 aaKnown RBP4.82□□□□□ -1.64
BRCA2-202ENST00000470094 SP2Q02086 613 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 SESTD1Q86VW0 696 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 RASAL3Q86YV0 1011 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 SPARTQ8N0X7 666 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 LRRC71Q8N4P6 559 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 PPP2R3CQ969Q6 453 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 BTBD1Q9H0C5 482 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 XPNPEP3Q9NQH7 507 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 DDX21Q9NR30 783 aaKnown RBP eCLIP4.82□□□□□ -1.64
BRCA2-202ENST00000470094 HDAC9Q9UKV0 1011 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 COX11Q9Y6N1 276 aa4.82□□□□□ -1.64
BRCA2-202ENST00000470094 COL11A2P13942 1736 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-202ENST00000470094 A1L4Q6 167 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 QSOX1O00391 747 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 CCP110O43303 1012 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 DRD4P21917 467 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 PCSK6P29122 969 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 ADORA2AP29274 412 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 PDE1AP54750 535 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms