RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PLEKHG4Q58EX7 1191 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 MTERF4Q7Z6M4 381 aaKnown RBP19.1■□□□□ 0.65
SMC4-211ENST00000469858 SLC13A5Q86YT5 568 aaPredicted RBP19.1■□□□□ 0.65
SMC4-211ENST00000469858 FNIP1Q8TF40 1166 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 UROC1Q96N76 676 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 HEXIM1O94992 359 aaKnown RBP19.1■□□□□ 0.65
SMC4-211ENST00000469858 ODC1P11926 461 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 MDH1BQ5I0G3 518 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 KIAA0319Q5VV43 1072 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 CCDC50Q8IVM0 306 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 URGCPQ8TCY9 931 aa19.1■□□□□ 0.65
SMC4-211ENST00000469858 TCRBV7S2A1N4TA0A589 114 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 CLDN5O00501 218 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 GLI1P08151 1106 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 NOMO2Q5JPE7 1267 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 ZFYVE27Q5T4F4 411 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 CD300LGQ6UXG3 332 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 SLC39A5Q6ZMH5 540 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 TMEM110Q86TL2 294 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 KATNAL2Q8IYT4 538 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 FUKQ8N0W3 1084 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 STK32AQ8WU08 396 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 SCLYQ96I15 445 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 HNRNPABQ99729 332 aaKnown RBP19.09■□□□□ 0.65
SMC4-211ENST00000469858 SYT15Q9BQS2 421 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 KLHL11Q9NVR0 708 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 AMACRQ9UHK6 382 aa19.09■□□□□ 0.65
SMC4-211ENST00000469858 ZSCAN5CA6NGD5 496 aaPredicted RBP19.08■□□□□ 0.65
SMC4-211ENST00000469858 F8W810 466 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 B4GALT3O60512 393 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 GRAP2O75791 330 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 GABBR2O75899 941 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 ITGB1P05556 798 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 MNX1P50219 401 aaPredicted RBP19.08■□□□□ 0.65
SMC4-211ENST00000469858 SNX16P57768 344 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 ATP13A4Q4VNC1 1196 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 OLFML1Q6UWY5 402 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 ZNF280BQ86YH2 543 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 SCUBE3Q8IX30 993 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 GSPT2Q8IYD1 628 aaKnown RBP19.08■□□□□ 0.65
SMC4-211ENST00000469858 HNRNPLLQ8WVV9 542 aaKnown RBP19.08■□□□□ 0.65
SMC4-211ENST00000469858 SEPT8Q92599 483 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 RUBCNQ92622 972 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 MED10Q9BTT4 135 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 B3GNT5Q9BYG0 378 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 PPP1R12CQ9BZL4 782 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 HIPK3Q9H422 1215 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 SLITRK6Q9H5Y7 841 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 CRTAC1Q9NQ79 661 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 TMEM161AQ9NX61 479 aa19.08■□□□□ 0.65
SMC4-211ENST00000469858 ENPP3O14638 875 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 PAPSS1O43252 624 aaPredicted RBP19.08■□□□□ 0.64
SMC4-211ENST00000469858 DDHD2O94830 711 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 CCL23P55773 120 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 GUCY2DQ02846 1103 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 RNASELQ05823 741 aaKnown RBP19.08■□□□□ 0.64
SMC4-211ENST00000469858 ANKRD33Q7Z3H0 272 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 ZDHHC14Q8IZN3 488 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 CRISPLD2Q9H0B8 497 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 MTUS1Q9ULD2 1270 aa19.08■□□□□ 0.64
SMC4-211ENST00000469858 DCDC2CA8MYV0 355 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 LRCH4O75427 683 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 ZRANB2O95218 330 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMC4-211ENST00000469858 MYBL2P10244 700 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 LCP1P13796 627 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 GPD1P21695 349 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 SMC1AQ14683 1233 aaKnown RBP19.07■□□□□ 0.64
SMC4-211ENST00000469858 TRIM60Q495X7 471 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 TXNRD3NBQ6F5E7 133 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 DCLRE1AQ6PJP8 1040 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 METTL23Q86XA0 190 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 PRELID2Q8N945 189 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 EXD1Q8NHP7 514 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 RSPH1Q8WYR4 309 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 DUSP16Q9BY84 665 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 EPB41L5Q9HCM4 733 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 TBC1D13Q9NVG8 400 aa19.07■□□□□ 0.64
SMC4-211ENST00000469858 ESYT3A0FGR9 886 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 MYBPHLA2RUH7 354 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 XPO1O14980 1071 aaKnown RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 PHF2O75151 1096 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 KRT1P04264 644 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 PCSK1P29120 753 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 FLT3P36888 993 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 PLA2G4AP47712 749 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 SLC8A3P57103 927 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 SLC6A3Q01959 620 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 DSC1Q08554 894 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 FAAP100Q0VG06 881 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 TAF5Q15542 800 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 PPP2R5EQ16537 467 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 KCTD19Q17RG1 926 aaPredicted RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 TCTN1Q2MV58 587 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 BEND6Q5SZJ8 279 aaPredicted RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 LRRC38Q5VT99 294 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 TRNP1Q6NT89 227 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 CCNI2Q6ZMN8 369 aaPredicted RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 PAQR9Q6ZVX9 377 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 ARFGAP1Q8N6T3 406 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 CCDC26Q8TAB7 109 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms