RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ZNF677Q86XU0 584 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 ZNF397Q8NF99 534 aaPredicted RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 SLC2A14Q8TDB8 520 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 SMG7Q92540 1137 aaKnown RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 KAT5Q92993 513 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 PSMG2Q969U7 264 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 TRMT2BQ96GJ1 504 aaKnown RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 MYRFLQ96LU7 910 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 SEPT5Q99719 369 aaPredicted RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 RBSNQ9H1K0 784 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 UXTQ9UBK9 157 aaPredicted RBP13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 HMGXB4Q9UGU5 601 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 TSC2P49815 1807 aa13.39□□□□□ -0.27
SPTLC1-204ENST00000469778 F8VZ95 297 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 SETSIPP0DME0 302 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 NPR3P17342 541 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 SOX5P35711 763 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 PBX1P40424 430 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 USP8P40818 1118 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 EPHA5P54756 1037 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 JAM2P57087 298 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 SNX16P57768 344 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 MRPS5P82675 430 aaKnown RBP13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 DLX2Q07687 328 aaPredicted RBP13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 TWF1Q12792 350 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 RAPGEF1Q13905 1077 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 TRIM14Q14142 442 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 TMC5Q6UXY8 1006 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 FAM35AQ86V20 835 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 C12orf29Q8N999 325 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 STK32AQ8WU08 396 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 SUSD6Q92537 303 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 ZNF707Q96C28 371 aaPredicted RBP13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 XPO4Q9C0E2 1151 aaKnown RBP13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 WDR6Q9NNW5 1121 aaKnown RBP13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 FHOD1Q9Y613 1164 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 CLUHO75153 1309 aa13.38□□□□□ -0.27
SPTLC1-204ENST00000469778 RNF225M0QZC1 329 aaPredicted RBP13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 O00370 1275 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 CYP26A1O43174 497 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 HCRTO43612 131 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 RFPL2O75678 378 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 AP1G2O75843 785 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 TPM1P09493 284 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 PFKLP17858 780 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 BCAT1P54687 386 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 CBX2Q14781 532 aaPredicted RBP13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 PPP1R26Q5T8A7 1209 aaPredicted RBP13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 SPECC1LQ69YQ0 1117 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 GJB7Q6PEY0 223 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 DENND5BQ6ZUT9 1274 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 GAS2L3Q86XJ1 694 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 SCN4BQ8IWT1 228 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 NUP93Q8N1F7 819 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 ZNF606Q8WXB4 792 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 SYN2Q92777 582 aaPredicted RBP13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 TRIM5Q9C035 493 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 ZNF518BQ9C0D4 1074 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 LHX5Q9H2C1 402 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 CYLDQ9NQC7 956 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 ASAH2Q9NR71 780 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 KRT82Q9NSB4 513 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 IL37Q9NZH6 218 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 PRKAG3Q9UGI9 489 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 USTQ9Y2C2 406 aa13.37□□□□□ -0.27
SPTLC1-204ENST00000469778 GRXCR2A6NFK2 248 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 F8VP50 259 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 H3BQ06 376 aaPredicted RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 CCL16O15467 120 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 MBTPS2O43462 519 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 CCDC130P13994 396 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 FERP16591 822 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 ATF6P18850 670 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 CDC25CP30307 473 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 GNA15P30679 374 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 CLCN1P35523 988 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 KRT9P35527 623 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 APBA1Q02410 837 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 BST2Q10589 180 aaKnown RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 SMAD2Q15796 467 aaKnown RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 DDR2Q16832 855 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 PTCRAQ6ISU1 281 aaPredicted RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 C12orf76Q8N812 135 aaPredicted RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 PDZD8Q8NEN9 1154 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 KCTD13Q8WZ19 329 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 OVCA2Q8WZ82 227 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 MRFAP1L1Q96HT8 127 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms