RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CYP4A22Q5TCH4 519 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 WDR59Q6PJI9 974 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 FRMD5Q7Z6J6 570 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 TRIM59Q8IWR1 403 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 ZCWPW1Q9H0M4 648 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 ASAH2Q9NR71 780 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 WNT16Q9UBV4 365 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 ITGA11Q9UKX5 1188 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 STK25O00506 426 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 MOSPD3O75425 235 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 PNPLA4P41247 253 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 KRT83P78385 493 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 SNRNP35Q16560 246 aaKnown RBP18.78■□□□□ 0.6
MRPL28-208ENST00000469744 LRRTM3Q86VH5 581 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 THEM5Q8N1Q8 247 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 PDCL2Q8N4E4 241 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 ANKRD36BP1Q96IX9 119 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 ZSWIM3Q96MP5 696 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 PHOX2BQ99453 314 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 CHP1Q99653 195 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 SEPT5Q99719 369 aaPredicted RBP18.78■□□□□ 0.6
MRPL28-208ENST00000469744 PLA2G2FQ9BZM2 168 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 NUCKS1Q9H1E3 243 aaKnown RBP18.78■□□□□ 0.6
MRPL28-208ENST00000469744 GDE1Q9NZC3 331 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 L1RE1Q9UN81 338 aa18.78■□□□□ 0.6
MRPL28-208ENST00000469744 EIF3CLB5ME19 914 aaKnown RBP18.77■□□□□ 0.6
MRPL28-208ENST00000469744 ZNF197O14709 1029 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 RPL13P26373 211 aaKnown RBP18.77■□□□□ 0.6
MRPL28-208ENST00000469744 ALDH1A3P47895 512 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 EPHB3P54753 998 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 ADAM9Q13443 819 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 FAM78AQ5JUQ0 283 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 TANGO2Q6ICL3 276 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 EEF2KMTQ96G04 330 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 EIF3CQ99613 913 aaKnown RBP18.77■□□□□ 0.6
MRPL28-208ENST00000469744 TBC1D17Q9HA65 648 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 METTL14Q9HCE5 456 aaKnown RBP18.77■□□□□ 0.6
MRPL28-208ENST00000469744 ARHGEF3Q9NR81 526 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 SLC2A4RGQ9NR83 387 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 SNX9Q9Y5X1 595 aa18.77■□□□□ 0.6
MRPL28-208ENST00000469744 SLC16A3O15427 465 aaKnown RBP18.77■□□□□ 0.59
MRPL28-208ENST00000469744 HCRTO43612 131 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 DLATP10515 647 aaKnown RBP18.77■□□□□ 0.59
MRPL28-208ENST00000469744 RFX1P22670 979 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 ACAT1P24752 427 aaKnown RBP18.77■□□□□ 0.59
MRPL28-208ENST00000469744 CLCN5P51795 746 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 EPHA5P54756 1037 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 PTPN5P54829 565 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 RBP5P82980 135 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 PLD1Q13393 1074 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 TEAD2Q15562 447 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 MGAT5BQ3V5L5 792 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 ARHGAP29Q52LW3 1261 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 HS2ST1Q7LGA3 356 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 TMC8Q8IU68 726 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 LRRC52Q8N7C0 313 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 NEK11Q8NG66 645 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 SHKBP1Q8TBC3 707 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 SYN2Q92777 582 aaPredicted RBP18.77■□□□□ 0.59
MRPL28-208ENST00000469744 CCDC127Q96BQ5 260 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 LPIN3Q9BQK8 851 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 LRRC3Q9BY71 257 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 PDCL3Q9H2J4 239 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 HAUS4Q9H6D7 363 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 ZNF334Q9HCZ1 680 aaPredicted RBP18.77■□□□□ 0.59
MRPL28-208ENST00000469744 TMLHEQ9NVH6 421 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 FAM86C1Q9NVL1 165 aa18.77■□□□□ 0.59
MRPL28-208ENST00000469744 ABI2Q9NYB9 513 aaPredicted RBP18.77■□□□□ 0.59
MRPL28-208ENST00000469744 A0A1W2PRU2 124 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 H0Y858 1186 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 HUS1O60921 280 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 URI1O94763 535 aaPredicted RBP18.76■□□□□ 0.59
MRPL28-208ENST00000469744 TNNC2P02585 160 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 AOC1P19801 751 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 FCARP24071 287 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 ARHGAP25P42331 645 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 KLK7P49862 253 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 CCDC142Q17RM4 750 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 STXBP5Q5T5C0 1151 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 ACRBPQ8NEB7 543 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 WDR24Q96S15 920 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 PRRX2Q99811 253 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 SLITRK6Q9H5Y7 841 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 KIAA1586Q9HCI6 787 aa18.76■□□□□ 0.59
MRPL28-208ENST00000469744 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.76■□□□□ 0.59
MRPL28-208ENST00000469744 FANCGO15287 622 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 GALR2O43603 387 aaPredicted RBP18.75■□□□□ 0.59
MRPL28-208ENST00000469744 ATF6P18850 670 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 NR2F2P24468 414 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 CYP24A1Q07973 514 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 GRM2Q14416 872 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 SURF1Q15526 300 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 DUOXA2Q1HG44 320 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 OSTM1Q86WC4 334 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 WDR49Q8IV35 697 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 STKLD1Q8NE28 680 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 GIPC2Q8TF65 315 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 TSC1Q92574 1164 aa18.75■□□□□ 0.59
MRPL28-208ENST00000469744 HPDLQ96IR7 371 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms