RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 DNMT3BQ9UBC3 853 aaKnown RBP4.94□□□□□ -1.62
VPS8-220ENST00000469713 NDRG4Q9ULP0 352 aaKnown RBP4.94□□□□□ -1.62
VPS8-220ENST00000469713 CDY1Q9Y6F8 540 aa4.94□□□□□ -1.62
VPS8-220ENST00000469713 LOC102724159A0A0B4J2E5 919 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 CENPVL1A0A0U1RR11 272 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 FAM234BA2RU67 622 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 B8ZZF3 427 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 TRIAP1O43715 76 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 INMTO95050 263 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 RASAL1O95294 804 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 FOSP01100 380 aaPredicted RBP4.93□□□□□ -1.62
VPS8-220ENST00000469713 PPIFP30405 207 aaKnown RBP4.93□□□□□ -1.62
VPS8-220ENST00000469713 PRKAG1P54619 331 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 GUCY1B3Q02153 619 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 KCNAB1Q14722 419 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 KRT72Q14CN4 511 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 PWP2Q15269 919 aaKnown RBP4.93□□□□□ -1.62
VPS8-220ENST00000469713 TUBB8Q3ZCM7 444 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 TIGD2Q4W5G0 525 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 ARMC6Q6NXE6 501 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 KRT28Q7Z3Y7 464 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 FAM109AQ8N4B1 249 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 PPP2R3CQ969Q6 453 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 STK33Q9BYT3 514 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 MAGEB5Q9BZ81 275 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 NRDE2Q9H7Z3 1164 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 PPCSQ9HAB8 311 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 HEYLQ9NQ87 328 aaPredicted RBP4.93□□□□□ -1.62
VPS8-220ENST00000469713 INTS13Q9NVM9 706 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 ANKFY1Q9P2R3 1169 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 DKK4Q9UBT3 224 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 SERTAD3Q9UJW9 196 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 SLC39A10Q9ULF5 831 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 MAGED2Q9UNF1 606 aaPredicted RBP4.93□□□□□ -1.62
VPS8-220ENST00000469713 FZD1Q9UP38 647 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 SSX2IPQ9Y2D8 614 aa4.93□□□□□ -1.62
VPS8-220ENST00000469713 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS8-220ENST00000469713 PODXLO00592 558 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 SRGAP2O75044 1071 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 PIAS2O75928 621 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 CSF1RP07333 972 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 PPP3CBP16298 524 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 GABRB3P28472 473 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 BUD31P41223 144 aaPredicted RBP4.92□□□□□ -1.62
VPS8-220ENST00000469713 ALDH9A1P49189 494 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 HNRNPMP52272 730 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS8-220ENST00000469713 SCAPQ12770 1279 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 E2F2Q14209 437 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 DHX8Q14562 1220 aaKnown RBP4.92□□□□□ -1.62
VPS8-220ENST00000469713 ZNF750Q32MQ0 723 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 GGT6Q6P531 493 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 CCDC174Q6PII3 467 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 FBXO38Q6PIJ6 1188 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 CRTC1Q6UUV9 634 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 SPRED1Q7Z699 444 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 GPR149Q86SP6 731 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 SYNE4Q8N205 404 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 GLIS1Q8NBF1 620 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 CCDC150Q8NCX0 1101 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 SLC30A5Q8TAD4 765 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 DNAJB14Q8TBM8 379 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 SSH3Q8TE77 659 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 SH3RF3Q8TEJ3 882 aaPredicted RBP4.92□□□□□ -1.62
VPS8-220ENST00000469713 TMEM171Q8WVE6 324 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 ASB10Q8WXI3 467 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 MUL1Q969V5 352 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 FAM136AQ96C01 138 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 OSBPL9Q96SU4 736 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 AMBRA1Q9C0C7 1298 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 GBA2Q9HCG7 927 aaPredicted RBP4.92□□□□□ -1.62
VPS8-220ENST00000469713 SLC2A4RGQ9NR83 387 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 CAPN11Q9UMQ6 739 aa4.92□□□□□ -1.62
VPS8-220ENST00000469713 FFAR2O15552 330 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 RGS10O43665 173 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 NBNO60934 754 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 PEX11BO96011 259 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 PDHA1P08559 390 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 ADORA2AP29274 412 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 COPAP53621 1224 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 SP2Q02086 613 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 FOXE3Q13461 319 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 TUBA3CQ13748 450 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 SF3B3Q15393 1217 aaKnown RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 PUM3Q15397 648 aaKnown RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 ELF2Q15723 593 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 ANO1Q5XXA6 986 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 ICE2Q659A1 982 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 SFRP4Q6FHJ7 346 aaPredicted RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 TUBA3EQ6PEY2 450 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 TSHZ1Q6ZSZ6 1077 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 USP49Q70CQ1 688 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 RHOUQ7L0Q8 258 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 PRRT2Q7Z6L0 340 aaPredicted RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 ARHGEF19Q8IW93 802 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 SLC15A3Q8IY34 581 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 SPARTQ8N0X7 666 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 ZNF527Q8NB42 609 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 CYP2W1Q8TAV3 490 aa4.91□□□□□ -1.62
VPS8-220ENST00000469713 SMCR8Q8TEV9 937 aaPredicted RBP4.91□□□□□ -1.62
VPS8-220ENST00000469713 IPO4Q8TEX9 1081 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms