RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 MAN2B1O00754 1011 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 SMC2O95347 1197 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 KRT13P13646 458 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 TARSP26639 723 aaKnown RBP19.49■□□□□ 0.71
PHGDH-204ENST00000469443 PSMC2P35998 433 aaKnown RBP19.49■□□□□ 0.71
PHGDH-204ENST00000469443 GRIK1P39086 918 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 CDH8P55286 799 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 ENPEPQ07075 957 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 SGSM1Q2NKQ1 1148 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 EDRF1Q3B7T1 1238 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 ARHGAP29Q52LW3 1261 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 ZNF658Q5TYW1 1059 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-204ENST00000469443 MON1AQ86VX9 555 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 CELF5Q8N6W0 485 aaKnown RBP19.49■□□□□ 0.71
PHGDH-204ENST00000469443 MAB21L3Q8N8X9 362 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 BPIFB1Q8TDL5 484 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 CSGALNACT1Q8TDX6 532 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 TAF4BQ92750 862 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 LRRC3BQ96PB8 259 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 BCO2Q9BYV7 579 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 DPEP3Q9H4B8 488 aa19.49■□□□□ 0.71
PHGDH-204ENST00000469443 HOOK1Q9UJC3 728 aaKnown RBP19.49■□□□□ 0.71
PHGDH-204ENST00000469443 SHISA7A6NL88 538 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 TRIM66O15016 1216 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 NCAM2O15394 837 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 TADA3O75528 432 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 ASS1P00966 412 aaKnown RBP19.48■□□□□ 0.71
PHGDH-204ENST00000469443 HLA-DRAP01903 254 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 P4HA1P13674 534 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 ANXA13P27216 316 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 AVPR1AP37288 418 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 MAGEA9P43362 315 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 COBLL1Q53SF7 1204 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 TXNDC8Q6A555 127 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 SCARA5Q6ZMJ2 495 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 B3GALNT2Q8NCR0 500 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 SPATA20Q8TB22 786 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 SMARCE1Q969G3 411 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 ELMO3Q96BJ8 720 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 SMG9Q9H0W8 520 aaKnown RBP19.48■□□□□ 0.71
PHGDH-204ENST00000469443 CIZ1Q9ULV3 898 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-204ENST00000469443 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 PIAS3Q9Y6X2 628 aa19.48■□□□□ 0.71
PHGDH-204ENST00000469443 TRIM49P0CI25 452 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 TRIM49CP0CI26 452 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 NBL1P41271 181 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 PIK3CAP42336 1068 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 PRCPP42785 496 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 RAP1GAPP47736 663 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 MLLT6P55198 1093 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-204ENST00000469443 DENND5BQ6ZUT9 1274 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 C1orf210Q8IVY1 113 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 ERCC4Q92889 916 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-204ENST00000469443 CLDN23Q96B33 292 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 B3GNT5Q9BYG0 378 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 GTPBP4Q9BZE4 634 aaKnown RBP19.47■□□□□ 0.71
PHGDH-204ENST00000469443 ELOVL4Q9GZR5 314 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 SDCBP2Q9H190 292 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 TDP1Q9NUW8 608 aa19.47■□□□□ 0.71
PHGDH-204ENST00000469443 MYO15AQ9UKN7 3530 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 F8VP50 259 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 GCLMP48507 274 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 MCCD1P59942 119 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-204ENST00000469443 PLCB2Q00722 1185 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 PPP3CAQ08209 521 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 SPOPLQ6IQ16 392 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 ELOA2Q8IYF1 753 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-204ENST00000469443 FAM3CQ92520 227 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 USP13Q92995 863 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-204ENST00000469443 MSANTD3Q96H12 275 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 ZFYVE19Q96K21 471 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 TNIP3Q96KP6 325 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 C8orf48Q96LL4 319 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 ZNF518BQ9C0D4 1074 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 KIF9Q9HAQ2 790 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 THG1LQ9NWX6 298 aaKnown RBP19.46■□□□□ 0.71
PHGDH-204ENST00000469443 EHD2Q9NZN4 543 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 VPS13AQ96RL7 3174 aa19.46■□□□□ 0.71
PHGDH-204ENST00000469443 MYO16Q9Y6X6 1858 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 USP34Q70CQ2 3546 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 PROB1E7EW31 1015 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 CLDN5O00501 218 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 CETN3O15182 167 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 RPS9P46781 194 aaKnown RBP19.45■□□□□ 0.7
PHGDH-204ENST00000469443 FZD5Q13467 585 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 ZNF268Q14587 947 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-204ENST00000469443 ZNF687Q8N1G0 1237 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 TSG101Q99816 390 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 TTLL2Q9BWV7 592 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 IMPG2Q9BZV3 1241 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 C8orf33Q9H7E9 229 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-204ENST00000469443 TMEM8AQ9HCN3 771 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 TRPC7Q9HCX4 862 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 NDRG2Q9UN36 371 aaKnown RBP19.45■□□□□ 0.7
PHGDH-204ENST00000469443 CCL26Q9Y258 94 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 ATP8B3O60423 1300 aa19.45■□□□□ 0.7
PHGDH-204ENST00000469443 KINO60870 393 aaKnown RBP19.44■□□□□ 0.7
PHGDH-204ENST00000469443 EPB41P11171 864 aaKnown RBP19.44■□□□□ 0.7
PHGDH-204ENST00000469443 CCNE1P24864 410 aa19.44■□□□□ 0.7
PHGDH-204ENST00000469443 GTF2H1P32780 548 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms