RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 ARMCX2Q7L311 632 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 ACOT1Q86TX2 421 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 LBHD1Q9BQE6 289 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 TRIM56Q9BRZ2 755 aaKnown RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 MAK16Q9BXY0 300 aaKnown RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 COX16Q9P0S2 106 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 USP15Q9Y4E8 981 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-221ENST00000469415 SNX9Q9Y5X1 595 aa18.72■□□□□ 0.59
MCF2L-221ENST00000469415 PDGFRAP16234 1089 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 EIF4BP23588 611 aaKnown RBP18.71■□□□□ 0.59
MCF2L-221ENST00000469415 KDELR1P24390 212 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 ATP5DP30049 168 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 CAV1Q03135 178 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 TTLL4Q14679 1199 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 SLC10A6Q3KNW5 377 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 DARS2Q6PI48 645 aaKnown RBP18.71■□□□□ 0.59
MCF2L-221ENST00000469415 TSHZ1Q6ZSZ6 1077 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.71■□□□□ 0.59
MCF2L-221ENST00000469415 CROCCP2Q86T23 111 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 XYLT1Q86Y38 959 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 PALM2Q8IXS6 379 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 KIF12Q96FN5 646 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 FZD8Q9H461 694 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 TCRBV5S1A1TA0A578 114 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 PDGFRBP09619 1106 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 ZC3H12AQ5D1E8 599 aaKnown RBP18.71■□□□□ 0.59
MCF2L-221ENST00000469415 CENPUQ71F23 418 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 SPATA21Q7Z572 469 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 ERO1BQ86YB8 467 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.71■□□□□ 0.59
MCF2L-221ENST00000469415 USP18Q9UMW8 372 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 DOCK1Q14185 1865 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 KRT4P19013 534 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 GCAP28676 217 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 ATXN1P54253 815 aaKnown RBP18.71■□□□□ 0.59
MCF2L-221ENST00000469415 OVGP1Q12889 678 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 STAT4Q14765 748 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 OASLQ15646 514 aaKnown RBP18.71■□□□□ 0.59
MCF2L-221ENST00000469415 TNFAIP8L3Q5GJ75 292 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 ARMC9Q7Z3E5 817 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 BBOF1Q8ND07 529 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 FBXO36Q8NEA4 188 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 RXFP2Q8WXD0 754 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 CDCA5Q96FF9 252 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 TMEM176AQ96HP8 235 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 PEBP4Q96S96 227 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 C2orf40Q9H1Z8 148 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 KLK14Q9P0G3 267 aa18.71■□□□□ 0.59
MCF2L-221ENST00000469415 A8MUI8 341 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 TMEM63AO94886 807 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 LGALS2P05162 132 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 NEFHP12036 1026 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 MCCD1P59942 119 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 CDCA2Q69YH5 1023 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 PRCCQ92733 491 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 PTPRHQ9HD43 1115 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 PIH1D1Q9NWS0 290 aaKnown RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 ERAP1Q9NZ08 941 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 XPO7Q9UIA9 1087 aaKnown RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 HBP1O60381 514 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 SUN1O94901 812 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 LSM8O95777 96 aaKnown RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 SLC25A11Q02978 314 aaKnown RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 LMNB2Q03252 620 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 SLC1A5Q15758 541 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 PPP1R15BQ5SWA1 713 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 RNASEH2BQ5TBB1 312 aaKnown RBP18.7■□□□□ 0.58
MCF2L-221ENST00000469415 ARHGEF18Q6ZSZ5 1173 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 FBF1Q8TES7 1133 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 CKAP2Q8WWK9 683 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 CPT1BQ92523 772 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 SMC6Q96SB8 1091 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 ECT2Q9H8V3 914 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 TSPAN16Q9UKR8 245 aa18.7■□□□□ 0.58
MCF2L-221ENST00000469415 A0A0G2JLL6 359 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 FAM47DPA6NHR8 397 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 SIGLEC16A6NMB1 481 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 GPX6P59796 221 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 YWHAGP61981 247 aaKnown RBP eCLIP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 SEPT7Q16181 437 aaKnown RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 PRRT2Q7Z6L0 340 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 ANKRD13AQ8IZ07 590 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 FITM2Q8N6M3 262 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 LENG1Q96BZ8 264 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 ACTR5Q9H9F9 607 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 DCTN4Q9UJW0 460 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 GRID1Q9ULK0 1009 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 C22orf31O95567 290 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 TFE3P19532 575 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 YARSP54577 528 aaKnown RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 TMEM132DQ14C87 1099 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 TRNP1Q6NT89 227 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 CCDC62Q6P9F0 684 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 CTAGE3PQ8IX95 158 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 PARP9Q8IXQ6 854 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 MPHOSPH6Q99547 160 aaKnown RBP18.69■□□□□ 0.58
MCF2L-221ENST00000469415 SETD4Q9NVD3 440 aa18.69■□□□□ 0.58
MCF2L-221ENST00000469415 SRRM3A6NNA2 597 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-221ENST00000469415 CYP3A5P20815 502 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms