RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ANKS3Q6ZW76 656 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 H2AFVQ71UI9 128 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 TTC30AQ86WT1 665 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 METTL23Q86XA0 190 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 CYFIP2Q96F07 1278 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 FUBP3Q96I24 572 aaKnown RBP eCLIP8.65□□□□□ -1.03
NPHP3-204ENST00000469232 DESI2Q9BSY9 194 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 TTPALQ9BTX7 342 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 B3GNT5Q9BYG0 378 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 DEF6Q9H4E7 631 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 RXFP1Q9HBX9 757 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 ABCB6Q9NP58 842 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 AAASQ9NRG9 546 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 HSFX1Q9UBD0 423 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 MTRRQ9UBK8 725 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 RWDD3Q9Y3V2 267 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 TIMM13Q9Y5L4 95 aaPredicted RBP8.65□□□□□ -1.03
NPHP3-204ENST00000469232 IRAK3Q9Y616 596 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 MYBPHLA2RUH7 354 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 LCHNA4D1U4 455 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 LINC01553A4QN01 128 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 USP27XA6NNY8 438 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 ZBBXA8MT70 800 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 H7C4K7 107 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-204ENST00000469232 ZSCAN12O43309 604 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 ATP2C2O75185 946 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 FTLP02792 175 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-204ENST00000469232 RB1P06400 928 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 PDGFRBP09619 1106 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 MYBL1P10243 752 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 IBSPP21815 317 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-204ENST00000469232 BMPR1AP36894 532 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 SCNN1AP37088 669 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 MAGEA11P43364 429 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 PLA2G4AP47712 749 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 BCAT1P54687 386 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 GALCP54803 685 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 UBE3AQ05086 875 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 GPR17Q13304 367 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 RTP2Q5QGT7 225 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 TAF3Q5VWG9 929 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 PLEKHA7Q6IQ23 1121 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 ZNF280DQ6N043 979 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 TAS1R1Q7RTX1 841 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 TMEM110Q86TL2 294 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 LRRTM3Q86VH5 581 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 MCOLN2Q8IZK6 566 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 THEM5Q8N1Q8 247 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 SCML4Q8N228 414 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 TXLNBQ8N3L3 684 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 TMEM35BQ8NCS4 154 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 HASPINQ8TF76 798 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 KCTD13Q8WZ19 329 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 PPP1R13BQ96KQ4 1090 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 CALR3Q96L12 384 aaKnown RBP8.64□□□□□ -1.03
NPHP3-204ENST00000469232 HSFY1Q96LI6 401 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 HEXIM2Q96MH2 286 aaKnown RBP8.64□□□□□ -1.03
NPHP3-204ENST00000469232 SAMD11Q96NU1 681 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 DUSP16Q9BY84 665 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 PNPLA8Q9NP80 782 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 LUC7LQ9NQ29 371 aaKnown RBP8.64□□□□□ -1.03
NPHP3-204ENST00000469232 FNIP2Q9P278 1114 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 CYTH4Q9UIA0 394 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 GTF3C4Q9UKN8 822 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 TSPAN16Q9UKR8 245 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 MAFFQ9ULX9 164 aa8.64□□□□□ -1.03
NPHP3-204ENST00000469232 CEP290O15078 2479 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 A0A0U1RQJ8 604 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 ESPNB1AK53 854 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 NT5C1B-RDH14C9J2C7 533 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 HHLA1C9JL84 531 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 H0YGN5 161 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 XPO1O14980 1071 aaKnown RBP8.63□□□□□ -1.03
NPHP3-204ENST00000469232 TLL1O43897 1013 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 IPO7O95373 1038 aaKnown RBP8.63□□□□□ -1.03
NPHP3-204ENST00000469232 VNN2O95498 520 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 CD19P15391 556 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 PBX3P40426 434 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 ERVK-21P61565 698 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 KCNC4Q03721 635 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 ORC1Q13415 861 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 NFE2Q16621 373 aaPredicted RBP8.63□□□□□ -1.03
NPHP3-204ENST00000469232 CCDC142Q17RM4 750 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 RAB41Q5JT25 222 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 RSPO2Q6UXX9 243 aaPredicted RBP8.63□□□□□ -1.03
NPHP3-204ENST00000469232 RNF10Q8N5U6 811 aaKnown RBP8.63□□□□□ -1.03
NPHP3-204ENST00000469232 C2orf15Q8WU43 125 aaKnown RBP8.63□□□□□ -1.03
NPHP3-204ENST00000469232 UBE2Q2Q8WVN8 375 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 ATRIPQ8WXE1 791 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 TRIM11Q96F44 468 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 PCED1BQ96HM7 432 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 CEP295NLQ96MC4 621 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 LPIN3Q9BQK8 851 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 PACSIN1Q9BY11 444 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 TSGA10Q9BZW7 698 aa8.63□□□□□ -1.03
NPHP3-204ENST00000469232 ZBP1Q9H171 429 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms