RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 MAGED2Q9UNF1 606 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-217ENST00000469223 CYP8B1Q9UNU6 501 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 FNDC3AQ9Y2H6 1198 aaKnown RBP13.67□□□□□ -0.22
HDAC6-217ENST00000469223 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 E9PAM4 449 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 SLC28A2O43868 658 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
HDAC6-217ENST00000469223 NTRK1P04629 796 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 HMGA1P17096 107 aaKnown RBP13.66□□□□□ -0.22
HDAC6-217ENST00000469223 GABRG2P18507 467 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 SPAG1Q07617 926 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 SCRN1Q12765 414 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 ZC2HC1CQ53FD0 456 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-217ENST00000469223 EMC10Q5UCC4 262 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 DHRS13Q6UX07 377 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 CDC6Q99741 560 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 ACO2Q99798 780 aaKnown RBP13.66□□□□□ -0.22
HDAC6-217ENST00000469223 PI4K2AQ9BTU6 479 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 ZDHHC5Q9C0B5 715 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 LINC00597Q9H2U6 94 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 FAM124BQ9H5Z6 455 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-217ENST00000469223 POLD4Q9HCU8 107 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 TM7SF3Q9NS93 570 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 CENPEQ02224 2701 aa13.66□□□□□ -0.22
HDAC6-217ENST00000469223 B8ZZF3 427 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 FLRT2O43155 660 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 CILPO75339 1184 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 KAT7O95251 611 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 CYP17A1P05093 508 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 MCF2P10911 925 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 ODC1P11926 461 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 GNSP15586 552 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 TYMPP19971 482 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 MAOBP27338 520 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 GUCY2FP51841 1108 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
HDAC6-217ENST00000469223 HSF5Q4G112 596 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-217ENST00000469223 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 ZCCHC9Q8N567 271 aaKnown RBP13.65□□□□□ -0.22
HDAC6-217ENST00000469223 RHBDD1Q8TEB9 315 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 SH3RF2Q8TEC5 729 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 BAP1Q92560 729 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 CYP2S1Q96SQ9 504 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 GAREM1Q9H706 876 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 TMEM206Q9H813 350 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-217ENST00000469223 KCNJ14Q9UNX9 436 aa13.65□□□□□ -0.22
HDAC6-217ENST00000469223 SPTBN1Q01082 2364 aaKnown RBP13.65□□□□□ -0.22
HDAC6-217ENST00000469223 TRAV19A0A0A6YYK7 116 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 PPEF2O14830 753 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 CER1O95813 267 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 APODP05090 189 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 LRPAP1P30533 357 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 KIR2DL1P43626 348 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-217ENST00000469223 SLC6A11P48066 632 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 GPR15P49685 360 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 MYO1EQ12965 1108 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 SLC10A6Q3KNW5 377 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 GALNT17Q6IS24 598 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 PADI6Q6TGC4 694 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 PIK3AP1Q6ZUJ8 805 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 ERLEC1Q96DZ1 483 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 IFT74Q96LB3 600 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
HDAC6-217ENST00000469223 ZCWPW1Q9H0M4 648 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC6-217ENST00000469223 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
HDAC6-217ENST00000469223 MYH10P35580 1976 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 K7ERI5 159 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 ABLIM1O14639 778 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 CXCL8P10145 99 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 HAPLN1P10915 354 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-217ENST00000469223 MATKP42679 507 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 IL12RB1P42701 662 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 CLDN6P56747 220 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 ANAPC15P60006 121 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 TLE3Q04726 772 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 CCDC173Q0VFZ6 552 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 LY6DQ14210 128 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 SYCP2LQ5T4T6 812 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 SDHAF4Q5VUM1 108 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 MPZL3Q6UWV2 235 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 C12orf40Q86WS4 652 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 SNIP1Q8TAD8 396 aaKnown RBP13.63□□□□□ -0.23
HDAC6-217ENST00000469223 KCNB2Q92953 911 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 IPO9Q96P70 1041 aaKnown RBP13.63□□□□□ -0.23
HDAC6-217ENST00000469223 PNKPQ96T60 521 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 TCHPQ9BT92 498 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 TARS2Q9BW92 718 aaKnown RBP13.63□□□□□ -0.23
HDAC6-217ENST00000469223 MRPL4Q9BYD3 311 aaKnown RBP13.63□□□□□ -0.23
HDAC6-217ENST00000469223 ARHGEF4Q9NR80 690 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms