RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 BRDTQ58F21 947 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 XKR3Q5GH77 459 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 HERC4Q5GLZ8 1057 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 HYIQ5T013 277 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 FAM102BQ5T8I3 360 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 BICRALQ6AI39 1079 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 KLHL10Q6JEL2 608 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 RINT1Q6NUQ1 792 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 LRSAM1Q6UWE0 723 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 MPZL3Q6UWV2 235 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 ANO5Q75V66 913 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 KIAA0907Q7Z7F0 614 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 CREBRFQ8IUR6 639 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 C4orf19Q8IY42 314 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 MYCT1Q8N699 235 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 METTL13Q8N6R0 699 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 SYT2Q8N9I0 419 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 NETO2Q8NC67 525 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PLEKHO2Q8TD55 490 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 USP33Q8TEY7 942 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 TRAPPC12Q8WVT3 735 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 HPS3Q969F9 1004 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 ZBTB10Q96DT7 871 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 TMEM169Q96HH4 297 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 CUEDC2Q9H467 287 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 RNPEPQ9H4A4 650 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 SMARCAD1Q9H4L7 1026 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 MAGEF1Q9HAY2 307 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 SLC39A2Q9NP94 309 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 XPNPEP3Q9NQH7 507 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 ANKEF1Q9NU02 776 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 EXOC1Q9NV70 894 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PANK4Q9NVE7 773 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 CLDND1Q9NY35 253 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 FBLN5Q9UBX5 448 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PTPN22Q9Y2R2 807 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 X6R8D5 127 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 DOCK3Q8IZD9 2030 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PLXNA1Q9UIW2 1896 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 MGAMO43451 1857 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 DOCK5Q9H7D0 1870 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 MCM3APO60318 1980 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 IGKV6D-21A0A0A0MT36 114 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CCDC169A6NNP5 214 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 RSPH10B2B2RC85 870 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 HRKO00198 91 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 SEPT4O43236 478 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 KLRC4O43908 158 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 HBP1O60381 514 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 HIP1RO75146 1068 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 DUSP11O75319 330 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 TBCAO75347 108 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 RFPL3O75679 317 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 STBD1O95210 358 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 LYPLA2O95372 231 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 TFRCP02786 760 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CYBBP04839 570 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 MPOP05164 745 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 DBHP09172 617 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 RSPH10BP0C881 870 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CCDC192P0DO97 292 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 XRCC6P12956 609 aaKnown RBP eCLIP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 INSRRP14616 1297 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 MUTP22033 750 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 FPR2P25090 351 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 GRK2P25098 689 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 HSD3B2P26439 372 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 GRK3P35626 688 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 RARRES1P49788 294 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CPT1AP50416 773 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 POLGP54098 1239 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 STX17P56962 302 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 GJA9P57773 515 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 TMEM62Q0P6H9 643 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CBX2Q14781 532 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 KCNA10Q16322 511 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 STX1AQ16623 288 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 FSCN1Q16658 493 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 KIAA0753Q2KHM9 967 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 SLC9C1Q4G0N8 1177 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 ANO6Q4KMQ2 910 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 FAM47CQ5HY64 1035 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 MROH9Q5TGP6 573 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 PAQR3Q6TCH7 311 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CXCL17Q6UXB2 119 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 C1orf186Q6ZWK4 172 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 UNC13DQ70J99 1090 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CEP68Q76N32 757 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 PLPPR4Q7Z2D5 763 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CTU1Q7Z7A3 348 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 GAS2L3Q86XJ1 694 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 NELFCDQ8IXH7 590 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 CCDC65Q8IXS2 484 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 ELOA2Q8IYF1 753 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 LRRC71Q8N4P6 559 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 PPTC7Q8NI37 304 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 SLC7A14Q8TBB6 771 aa4.48□□□□□ -1.69
TMEM39A-204ENST00000468545 ATP8B4Q8TF62 1192 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms