RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 CSNK1G1Q9HCP0 422 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 ZNF334Q9HCZ1 680 aaPredicted RBP21.27■■□□□ 1
NPHP4-206ENST00000468253 MUTYHQ9UIF7 546 aa21.27■■□□□ 1
NPHP4-206ENST00000468253 KCNJ18B7U540 433 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 CLDN5O00501 218 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 CEBPBP17676 345 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 GABRR2P28476 465 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 GPR15P49685 360 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 RAD23BP54727 409 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 TDGQ13569 410 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 HTR4Q13639 388 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 KCNJ12Q14500 433 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 VWA3BQ502W6 1294 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 CDKAL1Q5VV42 579 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 ENOSF1Q7L5Y1 443 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 SLC44A3Q8N4M1 653 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 UBR7Q8N806 425 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 C12orf29Q8N999 325 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 GPR152Q8TDT2 470 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 SMARCD1Q96GM5 515 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 HEXIM2Q96MH2 286 aaKnown RBP21.26■□□□□ 0.99
NPHP4-206ENST00000468253 BPIFA3Q9BQP9 254 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 MED10Q9BTT4 135 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 INTS2Q9H0H0 1204 aaKnown RBP21.26■□□□□ 0.99
NPHP4-206ENST00000468253 ATXN3LQ9H3M9 355 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 NDST4Q9H3R1 872 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 COMMD8Q9NX08 183 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 HMGXB4Q9UGU5 601 aa21.26■□□□□ 0.99
NPHP4-206ENST00000468253 A0A1W2PRU2 124 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 LRRC10BA6NIK2 292 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 F8VP50 259 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 DDX6P26196 483 aaKnown RBP eCLIP21.25■□□□□ 0.99
NPHP4-206ENST00000468253 PPP3CCP48454 512 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 ZXDAP98168 799 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 MYL5Q02045 173 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 LRMPQ12912 555 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 EXOC3L4Q17RC7 722 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 ARHGAP15Q53QZ3 475 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 SDHAF4Q5VUM1 108 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 POTEHQ6S545 545 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 C11orf57Q6ZUT1 292 aaPredicted RBP21.25■□□□□ 0.99
NPHP4-206ENST00000468253 DENND5BQ6ZUT9 1274 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 FAM35AQ86V20 835 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 SLC4A11Q8NBS3 891 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 SLC2A14Q8TDB8 520 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 ING5Q8WYH8 240 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 E2F7Q96AV8 911 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 DOCK6Q96HP0 2047 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 ARID3AQ99856 593 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 TTLL2Q9BWV7 592 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 IL37Q9NZH6 218 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 C2orf16Q68DN1 1984 aa21.25■□□□□ 0.99
NPHP4-206ENST00000468253 NOTCH4Q99466 2003 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 ECI2O75521 394 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 ASGR2P07307 311 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 ACO1P21399 889 aaKnown RBP21.24■□□□□ 0.99
NPHP4-206ENST00000468253 MTMR3Q13615 1198 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 TEAD2Q15562 447 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 MIIPQ5JXC2 388 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 ARHGAP17Q68EM7 881 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 PHLDB3Q6NSJ2 640 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 TMEM150AQ86TG1 271 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 NUP93Q8N1F7 819 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 PPM1KQ8N3J5 372 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 SMARCD2Q92925 531 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 ASB16Q96NS5 453 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 GCNAQ96QF7 691 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 UBXN6Q9BZV1 441 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 TASP1Q9H6P5 420 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 DMAP1Q9NPF5 467 aaPredicted RBP21.24■□□□□ 0.99
NPHP4-206ENST00000468253 FANCLQ9NW38 375 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 CNTN6Q9UQ52 1028 aa21.24■□□□□ 0.99
NPHP4-206ENST00000468253 NRG2O14511 850 aaPredicted RBP21.23■□□□□ 0.99
NPHP4-206ENST00000468253 AP1G2O75843 785 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 RTN3O95197 1032 aaPredicted RBP21.23■□□□□ 0.99
NPHP4-206ENST00000468253 PAEPP09466 180 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 ORC1Q13415 861 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 FAM78AQ5JUQ0 283 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 PARM1Q6UWI2 310 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 ELSPBP1Q96BH3 223 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 ZSWIM3Q96MP5 696 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 DUSP16Q9BY84 665 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 EPHX3Q9H6B9 360 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 PNPLA8Q9NP80 782 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 TMEM30AQ9NV96 361 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 GCNT4Q9P109 453 aa21.23■□□□□ 0.99
NPHP4-206ENST00000468253 MAGED2Q9UNF1 606 aaPredicted RBP21.23■□□□□ 0.99
NPHP4-206ENST00000468253 SMTNL1A8MU46 457 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 TNFRSF10BO14763 440 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 FAM200BP0CF97 657 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 VDRP11473 427 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 CCDC130P13994 396 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 GJA1P17302 382 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 PFKLP17858 780 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 PON1P27169 355 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 CACNA2D1P54289 1103 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 NCAPHQ15003 741 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 ZNF394Q53GI3 561 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 TRIM65Q6PJ69 517 aa21.22■□□□□ 0.99
NPHP4-206ENST00000468253 RRAGAQ7L523 313 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms