RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TTC9BQ8N6N2 239 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 DNASE2BQ8WZ79 361 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 LXNQ9BS40 222 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 ZDHHC4Q9NPG8 344 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 MAN2B2Q9Y2E5 1009 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 TMEM131Q92545 1883 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 ICE1Q9Y2F5 2266 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 NID2Q14112 1375 aa12.69□□□□□ -0.38
VPS26A-204ENST00000467852 ANK1P16157 1881 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 CITO14578 2027 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 RFPL3O75679 317 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 KAT7O95251 611 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 F11P03951 625 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 NMT1P30419 496 aaKnown RBP12.68□□□□□ -0.38
VPS26A-204ENST00000467852 TNFRSF4P43489 277 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 KIR2DL1P43626 348 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-204ENST00000467852 MYBPC2Q14324 1141 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 RTN1Q16799 776 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 KIAA1614Q5VZ46 1190 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 ARMCX5Q6P1M9 558 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
VPS26A-204ENST00000467852 GIPC2Q8TF65 315 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 KCNE4Q8WWG9 221 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 TSC1Q92574 1164 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 ZNF578Q96N58 590 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-204ENST00000467852 ACAP3Q96P50 834 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 POLR3FQ9H1D9 316 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-204ENST00000467852 C2orf40Q9H1Z8 148 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 LINC00597Q9H2U6 94 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 ZSWIM4Q9H7M6 989 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 LRRC4CQ9HCJ2 640 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
VPS26A-204ENST00000467852 MYOFQ9NZM1 2061 aa12.68□□□□□ -0.38
VPS26A-204ENST00000467852 A0A0A0MRY4 1105 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 ACKR2O00590 384 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 ZBTB39O15060 712 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 KLK10O43240 276 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 USP17L7P0C7H9 530 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 NFKB2Q00653 900 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 BNC1Q01954 994 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 PPP2R5CQ13362 524 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 TMEM150AQ86TG1 271 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 SFTPA1Q8IWL2 248 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 ETNPPLQ8TBG4 499 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
VPS26A-204ENST00000467852 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
VPS26A-204ENST00000467852 DPH1Q9BZG8 443 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 IL25Q9H293 177 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 POLQO75417 2590 aa12.67□□□□□ -0.38
VPS26A-204ENST00000467852 CYP3A7-CYP3A51PA0A087WV96 503 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 ANO9A1A5B4 782 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 M0QZQ0 153 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 ENC1O14682 589 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 PCDHGA12O60330 932 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 LARGE1O95461 756 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 HOXB2P14652 356 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 ATF6P18850 670 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 LIG1P18858 919 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 CYP3A7P24462 503 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 HSPA4P34932 840 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 EIF2DP41214 584 aaKnown RBP12.66□□□□□ -0.38
VPS26A-204ENST00000467852 GRIA2P42262 883 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 SLC6A11P48066 632 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 USP4Q13107 963 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 EPHA7Q15375 998 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 XKR4Q5GH76 650 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 CDCA2Q69YH5 1023 aaPredicted RBP12.66□□□□□ -0.38
VPS26A-204ENST00000467852 XKR5Q6UX68 686 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 ALKAL1Q6UXT8 129 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 TMEM206Q9H813 350 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 ARHGEF4Q9NR80 690 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 STARD5Q9NSY2 213 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
VPS26A-204ENST00000467852 TRAV19A0A0A6YYK7 116 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 A0A1B0GVT2 93 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 BLACEA4D250 179 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 TDP2O95551 362 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 CKMP06732 381 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 NCAM1P13591 858 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 NDUFV2P19404 249 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 CD6P30203 668 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 CCT8P50990 548 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 TLE1Q04724 770 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-204ENST00000467852 CTTNQ14247 550 aaKnown RBP12.65□□□□□ -0.38
VPS26A-204ENST00000467852 INF2Q27J81 1249 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 OVOS1Q6IE37 1185 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 FBXL19Q6PCT2 694 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 TPH2Q8IWU9 490 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 EXD3Q8N9H8 876 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 CADM4Q8NFZ8 388 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 ZFRQ96KR1 1074 aaKnown RBP12.65□□□□□ -0.38
VPS26A-204ENST00000467852 ZMAT2Q96NC0 199 aaKnown RBP12.65□□□□□ -0.38
VPS26A-204ENST00000467852 MTMR9Q96QG7 549 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 C22orf23Q9BZE7 217 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms