RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CCDC192P0DO97 292 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 DRD1P21728 446 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 MAGEA11P43364 429 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 GALK1P51570 392 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 ZNF77Q15935 545 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 NAIF1Q69YI7 327 aaPredicted RBP18.49■□□□□ 0.55
TRIM56-203ENST00000467847 C4orf50Q6ZRC1 276 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 CACNA2D4Q7Z3S7 1137 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 FSIP1Q8NA03 581 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 OR5B17Q8NGF7 314 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 OSCP1Q8WVF1 389 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 ATP2A3Q93084 1043 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 SLC22A12Q96S37 553 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 SYT15Q9BQS2 421 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 ECT2Q9H8V3 914 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 FBRSL1Q9HCM7 1045 aaKnown RBP18.49■□□□□ 0.55
TRIM56-203ENST00000467847 PTPRDP23468 1912 aa18.49■□□□□ 0.55
TRIM56-203ENST00000467847 MYO16Q9Y6X6 1858 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 AXIN1O15169 862 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 ATP2C2O75185 946 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 GJA4P35212 333 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 IFNAR2P48551 515 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 PSMC1P62191 440 aaKnown RBP18.48■□□□□ 0.55
TRIM56-203ENST00000467847 USP4Q13107 963 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 DUOXA2Q1HG44 320 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 FAM171BQ6P995 826 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 DPH6Q7L8W6 267 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 CBWD2Q8IUF1 395 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 ARL14EPQ8N8R7 260 aaPredicted RBP18.48■□□□□ 0.55
TRIM56-203ENST00000467847 GLIS3Q8NEA6 775 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 KBTBD7Q8WVZ9 684 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 HPS3Q969F9 1004 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 ARRDC1-AS1Q9H2J1 176 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 ZSCAN16Q9H4T2 348 aaPredicted RBP18.48■□□□□ 0.55
TRIM56-203ENST00000467847 POLR3BQ9NW08 1133 aaPredicted RBP18.48■□□□□ 0.55
TRIM56-203ENST00000467847 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
TRIM56-203ENST00000467847 CDH9Q9ULB4 789 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 MTMR6Q9Y217 621 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 WNT6Q9Y6F9 365 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 USP24Q9UPU5 2620 aa18.48■□□□□ 0.55
TRIM56-203ENST00000467847 KIAA1549LQ6ZVL6 1849 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 C2orf78A6NCI8 922 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 LMO2P25791 158 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 KCNB1Q14721 858 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 STK38Q15208 465 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 SURF1Q15526 300 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 FBXO43Q4G163 708 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 AASDHQ4L235 1098 aaPredicted RBP18.47■□□□□ 0.55
TRIM56-203ENST00000467847 LIMS2Q7Z4I7 341 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 KBTBD6Q86V97 674 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 CAMKK1Q8N5S9 505 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 SH3RF2Q8TEC5 729 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 DDX1Q92499 740 aaKnown RBP18.47■□□□□ 0.55
TRIM56-203ENST00000467847 MYLPFQ96A32 169 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 INTS4Q96HW7 963 aaKnown RBP18.47■□□□□ 0.55
TRIM56-203ENST00000467847 LOXL4Q96JB6 756 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 LRRC27Q9C0I9 530 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 TNMDQ9H2S6 317 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 HSPBP1Q9NZL4 362 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 GCNT4Q9P109 453 aa18.47■□□□□ 0.55
TRIM56-203ENST00000467847 EPN2O95208 641 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 HDCP19113 662 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 GRIK1P39086 918 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 RAP1GAPP47736 663 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 NASPP49321 788 aaPredicted RBP18.46■□□□□ 0.55
TRIM56-203ENST00000467847 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 SF3A2Q15428 464 aaKnown RBP18.46■□□□□ 0.55
TRIM56-203ENST00000467847 MAPRE1Q15691 268 aaKnown RBP18.46■□□□□ 0.55
TRIM56-203ENST00000467847 CCDC6Q16204 474 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 EML3Q32P44 896 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 VSTM1Q6UX27 236 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 WDR49Q8IV35 697 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 C12orf50Q8NA57 414 aaPredicted RBP18.46■□□□□ 0.55
TRIM56-203ENST00000467847 RPLP0P6Q8NHW5 317 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 CD101Q93033 1021 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 SPATA17Q96L03 361 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 HHIPQ96QV1 700 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 MMS19Q96T76 1030 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 KIAA1586Q9HCI6 787 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 CRTAC1Q9NQ79 661 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 ANGPTL2Q9UKU9 493 aa18.46■□□□□ 0.55
TRIM56-203ENST00000467847 STX6O43752 255 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 AKAP3O75969 853 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 PDGFRBP09619 1106 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 WARSP23381 471 aaKnown RBP18.45■□□□□ 0.54
TRIM56-203ENST00000467847 BDNFP23560 247 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 ANXA13P27216 316 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 HOXD13P35453 343 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 PDE6CP51160 858 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 NR1H3Q13133 447 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 PSMD2Q13200 908 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 IL31Q6EBC2 164 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 TRIM9Q9C026 710 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 KBTBD4Q9NVX7 518 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 ARHGAP26Q9UNA1 814 aa18.45■□□□□ 0.54
TRIM56-203ENST00000467847 SPTLC2O15270 562 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 EIF3DO15371 548 aaKnown RBP eCLIP18.44■□□□□ 0.54
TRIM56-203ENST00000467847 ZNF806P0C7X5 589 aa18.44■□□□□ 0.54
TRIM56-203ENST00000467847 DLATP10515 647 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms