RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	LTBP2	Q14767	1821 aa		12.96	□□□□□ -0.33
HDLBP-231	ENST00000467435	DCDC2C	A8MYV0	355 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435		F8VP50	259 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435		I3L4J1	428 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	RAD51C	O43502	376 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	ATP2C2	O75185	946 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	COL6A1	P12109	1028 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	GPD1	P21695	349 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	MRPS25	P82663	173 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	DSC1	Q08554	894 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CCDC142	Q17RM4	750 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	KIAA0319	Q5VV43	1072 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	OLFML1	Q6UWY5	402 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CD300LG	Q6UXG3	332 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	MTERF4	Q7Z6M4	381 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	ZDHHC17	Q8IUH5	632 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CCDC50	Q8IVM0	306 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	KATNAL2	Q8IYT4	538 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	FUK	Q8N0W3	1084 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	HDAC7	Q8WUI4	952 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	MED10	Q9BTT4	135 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	PPP1R12C	Q9BZL4	782 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	DDX47	Q9H0S4	455 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	HIPK3	Q9H422	1215 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	SLITRK6	Q9H5Y7	841 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	ELAC1	Q9H777	363 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CRTAC1	Q9NQ79	661 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CYLD	Q9NQC7	956 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	TBC1D13	Q9NVG8	400 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	STIM2	Q9P246	746 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	DSE	Q9UL01	958 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CDH9	Q9ULB4	789 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	CENPF	P49454	3210 aa		12.95	□□□□□ -0.34
HDLBP-231	ENST00000467435	TET1	Q8NFU7	2136 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	MYO16	Q9Y6X6	1858 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	ARHGEF37	A1IGU5	675 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435		M0QZQ0	153 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	XPO1	O14980	1071 aa	Known RBP	12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	B4GALT3	O60512	393 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	PHF2	O75151	1096 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	ZMYND10	O75800	440 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	CAPN15	O75808	1086 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	HEXIM1	O94992	359 aa	Known RBP	12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	KRT1	P04264	644 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	CYP11A1	P05108	521 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	TCF4	P15884	667 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	NPR3	P17342	541 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	PCSK1	P29120	753 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	ACADSB	P45954	432 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	PLA2G4A	P47712	749 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	SLC8A3	P57103	927 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	SLC7A5	Q01650	507 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	SLC6A3	Q01959	620 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	TCTN1	Q2MV58	587 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	ZFYVE27	Q5T4F4	411 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	LRRC38	Q5VT99	294 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	DCLRE1A	Q6PJP8	1040 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	TMEM110	Q86TL2	294 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	ABI1	Q8IZP0	508 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	DIS3L	Q8TF46	1054 aa	Known RBP	12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	RSPH1	Q8WYR4	309 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	SCLY	Q96I15	445 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	PIWIL1	Q96J94	861 aa	Known RBP	12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	FAM193B	Q96PV7	902 aa	Predicted RBP	12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	KRT82	Q9NSB4	513 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	KLHL11	Q9NVR0	708 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	KANSL3	Q9P2N6	904 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	DMGDH	Q9UI17	866 aa	Known RBP	12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	MTUS1	Q9ULD2	1270 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	LRFN2	Q9ULH4	789 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	PCDHB7	Q9Y5E2	793 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	VWA8	A3KMH1	1905 aa		12.94	□□□□□ -0.34
HDLBP-231	ENST00000467435	C2CD4B	A6NLJ0	364 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435		F8W810	466 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	TMEM189-UBE2V1	I3L0A0	370 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	CLDN5	O00501	218 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	ENPP3	O14638	875 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	PAPSS1	O43252	624 aa	Predicted RBP	12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	DDHD2	O94830	711 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	SEC31A	O94979	1220 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	PARN	O95453	639 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	CXCL10	P02778	98 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	ITGB1	P05556	798 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	FAM200B	P0CF97	657 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	HSPA8	P11142	646 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	LCP1	P13796	627 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	RPL34	P49207	117 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	CCL23	P55773	120 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	PLCB3	Q01970	1234 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	TLE2	Q04725	743 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	RNASEL	Q05823	741 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	FAAP100	Q0VG06	881 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	SMC1A	Q14683	1233 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	PPP2R5E	Q16537	467 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	FAM35A	Q86V20	835 aa		12.93	□□□□□ -0.34
HDLBP-231	ENST00000467435	ZNF280B	Q86YH2	543 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms