RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CA14Q9ULX7 337 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 NBEAQ8NFP9 2946 aa6.15□□□□□ -1.43
PTCD3-207ENST00000467273 C2orf16Q68DN1 1984 aa6.15□□□□□ -1.43
PTCD3-207ENST00000467273 ASH1LQ9NR48 2969 aaKnown RBP6.15□□□□□ -1.43
PTCD3-207ENST00000467273 GSTTP1A0A1W2PQM5 241 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 TMEM8BA6NDV4 472 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 ANHXE9PGG2 379 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 NCAM2O15394 837 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 NARSO43776 548 aaKnown RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 PSPNO60542 156 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 RETP07949 1114 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 ARP10275 920 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 FGFR1P11362 822 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 KCNA2P16389 499 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 EPCAMP16422 314 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 RPS9P46781 194 aaKnown RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 CLCN4P51793 760 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 LIMK1P53667 647 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 EPHB3P54753 998 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 SQSTM1Q13501 440 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 PPP2R5DQ14738 602 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 TMEM266Q2M3C6 531 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 BBS9Q3SYG4 887 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 AXDND1Q5T1B0 1012 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 VPS53Q5VIR6 699 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 LRRC55Q6ZSA7 311 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 TSPYL5Q86VY4 417 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 SPPL2CQ8IUH8 684 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 VPS52Q8N1B4 723 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 CELF5Q8N6W0 485 aaKnown RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 HDAC7Q8WUI4 952 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 DACT3Q96B18 629 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 AZI2Q9H6S1 392 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 VAT1LQ9HCJ6 419 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 SPATA6Q9NWH7 488 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 SIRT5Q9NXA8 310 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 MAGEC2Q9UBF1 373 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 SUSD2Q9UGT4 822 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 MBD1Q9UIS9 605 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 ST3GAL5Q9UNP4 418 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 NOC2LQ9Y3T9 749 aaKnown RBP6.14□□□□□ -1.43
PTCD3-207ENST00000467273 CLUHO75153 1309 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 COL1A2P08123 1366 aa6.14□□□□□ -1.43
PTCD3-207ENST00000467273 LAMA4Q16363 1823 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 KLRF2D3W0D1 207 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 PPP1R11O60927 126 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 N4BP1O75113 896 aaKnown RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 GLULP15104 373 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 ZSCAN20P17040 1043 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 MARK3P27448 753 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 CA8P35219 290 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 BCAR1P56945 870 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 IGBP1P78318 339 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 PFKPQ01813 784 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 SP4Q02446 784 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 CHRNEQ04844 493 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 CSTF1Q05048 431 aaKnown RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 TMEM62Q0P6H9 643 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 CSRP2Q16527 193 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 C2orf27AQ580R0 203 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 MTHFD1LQ6UB35 978 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 ECHDC2Q86YB7 292 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 SMC5Q8IY18 1101 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 ENAHQ8N8S7 591 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 DNAJB8Q8NHS0 232 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 THAP3Q8WTV1 239 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 CLDN23Q96B33 292 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 ZNF669Q96BR6 464 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 KLHL5Q96PQ7 755 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 RIOX1Q9H6W3 641 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 PRMT8Q9NR22 394 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-207ENST00000467273 CEP131Q9UPN4 1083 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 SSX2IPQ9Y2D8 614 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 ITPR1Q14643 2758 aa6.13□□□□□ -1.43
PTCD3-207ENST00000467273 DSPP15924 2871 aaKnown RBP6.12□□□□□ -1.43
PTCD3-207ENST00000467273 A0A0U1RQF3 1178 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-207ENST00000467273 HBP1O60381 514 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 PEX14O75381 377 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 CDC45O75419 566 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 NFASCO94856 1347 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 EPHX1P07099 455 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 FAM153BP0C7A2 387 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 LAMP2P13473 410 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 KLRC2P26717 231 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 PBX3P40426 434 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 PLP2Q04941 152 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 DUSP4Q13115 394 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 MTMR1Q13613 665 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 HTR4Q13639 388 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 PLCB4Q15147 1175 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 SPATS1Q496A3 300 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 SV2CQ496J9 727 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 MCMDC2Q4G0Z9 681 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 ZBTB41Q5SVQ8 909 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 IL31Q6EBC2 164 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 FAM228AQ86W67 206 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 KIAA0319LQ8IZA0 1049 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms