RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 UBXN1Q04323 297 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ICA1Q05084 483 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 SGCGQ13326 291 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 MEA1Q16626 185 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ZNF568Q3ZCX4 644 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 CCDC30Q5VVM6 783 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 TPGS2Q68CL5 300 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 FCRLBQ6BAA4 426 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 TLDC1Q6P9B6 456 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 CCDC149Q6ZUS6 474 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 FAM47EQ6ZV65 393 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 LPCAT2Q7L5N7 544 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 EPM2AIP1Q7L775 607 aaPredicted RBP6.15□□□□□ -1.42
LRCH3-212ENST00000466845 TAOK1Q7L7X3 1001 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 RSPH3Q86UC2 560 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 LRRTM3Q86VH5 581 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 CCDC13Q8IYE1 715 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ESX1Q8N693 406 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 OR6C4Q8NGE1 309 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 WDR48Q8TAF3 677 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 RUFY2Q8WXA3 655 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 SHC3Q92529 594 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 CENPIQ92674 756 aaPredicted RBP6.15□□□□□ -1.42
LRCH3-212ENST00000466845 TTC17Q96AE7 1141 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 GIMAP5Q96F15 307 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 EDEM3Q9BZQ6 932 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 B3GNT4Q9C0J1 378 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 BRD9Q9H8M2 597 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 RSAD1Q9HA92 442 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.15□□□□□ -1.42
LRCH3-212ENST00000466845 ANLNQ9NQW6 1124 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 PLSCR4Q9NRQ2 329 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 MCM9Q9NXL9 1143 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 GALNT8Q9NY28 637 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 DACT1Q9NYF0 836 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 IL1RAPL1Q9NZN1 696 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 NDOR1Q9UHB4 597 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 TRHDEQ9UKU6 1024 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 CBLCQ9ULV8 474 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 EDARQ9UNE0 448 aa6.15□□□□□ -1.42
LRCH3-212ENST00000466845 A2MP01023 1474 aa6.15□□□□□ -1.43
LRCH3-212ENST00000466845 CAMSAP2Q08AD1 1489 aa6.15□□□□□ -1.43
LRCH3-212ENST00000466845 C3P01024 1663 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 RRN3P2A6NIE6 340 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 B4E171 279 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 USO1O60763 962 aaKnown RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 DIAPH2O60879 1101 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 KCNJ13O60928 360 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 TSC22D2O75157 780 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 DDHD2O94830 711 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 YEATS4O95619 227 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 OLFM2O95897 454 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 IL18BPO95998 194 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 TOP1P11387 765 aaKnown RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PCNAP12004 261 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PTGS1P23219 599 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 MAP2K2P36507 400 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 HNF4AP41235 474 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 EPS15P42566 896 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 DNM2P50570 870 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 ARFIP1P53367 373 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 HSPA2P54652 639 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 JAM2P57087 298 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 NLRP5P59047 1200 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 TUBA1BP68363 451 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 KLHL30Q0D2K2 578 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 CDC16Q13042 620 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PPFIA1Q13136 1202 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 USP10Q14694 798 aaKnown RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 ARHGAP44Q17R89 818 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 C15orf59Q2T9L4 293 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 MAJINQ3KP22 176 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 ZMAT1Q5H9K5 638 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 ZNF362Q5T0B9 420 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 EMC10Q5UCC4 262 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 FAM205BPQ63HN1 556 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 OTUD7BQ6GQQ9 843 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 ATF7IPQ6VMQ6 1270 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PLEKHM3Q6ZWE6 761 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 TUBA1AQ71U36 451 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 CENPQQ7L2Z9 268 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 DNAJB7Q7Z6W7 309 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PTRH1Q86Y79 214 aaKnown RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PDCL2Q8N4E4 241 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 DENND1AQ8TEH3 1009 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 TBC1D5Q92609 795 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 RBM17Q96I25 401 aaKnown RBP6.14□□□□□ -1.43
LRCH3-212ENST00000466845 WNK4Q96J92 1243 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 SGCZQ96LD1 299 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 UBXN10Q96LJ8 280 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 NT5C1BQ96P26 610 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PPP1R9BQ96SB3 815 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 UQCC2Q9BRT2 126 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 BTBD2Q9BX70 525 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 MROH8Q9H579 483 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 SYNCQ9H7C4 482 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 ZWILCHQ9H900 591 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 SLC52A2Q9HAB3 445 aa6.14□□□□□ -1.43
LRCH3-212ENST00000466845 PPP1R14DQ9NXH3 145 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms