RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C1orf131Q8NDD1 294 aaKnown RBP9.05□□□□□ -0.96
HPS4-209ENST00000466781 SLC35G2Q8TBE7 412 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 ATP6V1G3Q96LB4 118 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 EIF3LQ9Y262 564 aaKnown RBP9.05□□□□□ -0.96
HPS4-209ENST00000466781 CFAP73A6NFT4 308 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 STX7O15400 261 aaKnown RBP9.05□□□□□ -0.96
HPS4-209ENST00000466781 FAM47DPA6NHR8 397 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 PTK7Q13308 1070 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 DYNC1I2Q13409 638 aaKnown RBP9.05□□□□□ -0.96
HPS4-209ENST00000466781 ZNF284Q2VY69 593 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 DNAL1Q4LDG9 190 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 XRRA1Q6P2D8 792 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 TFB1MQ8WVM0 346 aaKnown RBP9.05□□□□□ -0.96
HPS4-209ENST00000466781 HPDLQ96IR7 371 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 CCDC3Q9BQI4 270 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 REEP2Q9BRK0 252 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 DPP7Q9UHL4 492 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 FZD1Q9UP38 647 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 ROBO1Q9Y6N7 1651 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 KNDC1Q76NI1 1749 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 CAPN15O75808 1086 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 ANXA9O76027 345 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 GTF2E2P29084 291 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 GPC1P35052 558 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 PRIM2P49643 509 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 EPHB3P54753 998 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 GEMP55040 296 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 SNRPFP62306 86 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 CEP78Q5JTW2 689 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 KIAA2013Q8IYS2 634 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 MMGT1Q8N4V1 131 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 STAMBPL1Q96FJ0 436 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 RSAD1Q9HA92 442 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 DPP3Q9NY33 737 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 RNF112Q9ULX5 631 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 PDS5AQ29RF7 1337 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 PITPNM2Q9BZ72 1349 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 A0A1W2PQC6 194 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 ESYT3A0FGR9 886 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 FMO5P49326 533 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TGM3Q08188 693 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 CACHD1Q5VU97 1274 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 ZNF614Q8N883 585 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 RUBCNQ92622 972 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 FBXO32Q969P5 355 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 MXRA8Q9BRK3 442 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 WDCPQ9H6R7 721 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TRIM17Q9Y577 477 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 IGSF9BQ9UPX0 1349 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TK2O00142 265 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TBX3O15119 743 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 HLA-DRAP01903 254 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 SOX11P35716 441 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 ATXN3P54252 364 aaPredicted RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 DEFB115Q30KQ5 88 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 USP39Q53GS9 565 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 FAM83AQ86UY5 434 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 SGMS1Q86VZ5 419 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 RTFDC1Q9BY42 306 aaPredicted RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 GOLPH3Q9H4A6 298 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 UTP6Q9NYH9 597 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 LIMA1Q9UHB6 759 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 H0YC42 278 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 MAPK1P28482 360 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 PTPN7P35236 360 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TCF7P36402 384 aaPredicted RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 PLD1Q13393 1074 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 MRPL48Q96GC5 212 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 WNK4Q96J92 1243 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TAAR1Q96RJ0 339 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 OSBPL1AQ9BXW6 950 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 RANBP17Q9H2T7 1088 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 NPHS2Q9NP85 383 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 EXOSC4Q9NPD3 245 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 APPL1Q9UKG1 709 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 UBQLN1Q9UMX0 589 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 NEU2Q9Y3R4 380 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 CXCL11O14625 94 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 SPAG6O75602 509 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TAL1P17542 331 aaPredicted RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 GTF2H1P32780 548 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 MAPK9P45984 424 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 KPNA1P52294 538 aaPredicted RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 SPATA21Q7Z572 469 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 SOCS4Q8WXH5 440 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 DPF2Q92785 391 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 PNKPQ96T60 521 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 RMND5AQ9H871 391 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 TMEM8AQ9HCN3 771 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.04□□□□□ -0.96
HPS4-209ENST00000466781 PCDHB12Q9Y5F1 795 aa9.04□□□□□ -0.96
HPS4-209ENST00000466781 PARP4Q9UKK3 1724 aaKnown RBP9.04□□□□□ -0.96
HPS4-209ENST00000466781 SIGLEC1Q9BZZ2 1709 aa9.03□□□□□ -0.96
HPS4-209ENST00000466781 KPNA6O60684 536 aa9.03□□□□□ -0.96
HPS4-209ENST00000466781 CAND2O75155 1236 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms