RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 UBL4BQ8N7F7 174 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 NIPA2Q8N8Q9 360 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 ANKRD52Q8NB46 1076 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 B3GALNT2Q8NCR0 500 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 JOSD2Q8TAC2 188 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 URGCPQ8TCY9 931 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 SLC2A14Q8TDB8 520 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 IPO4Q8TEX9 1081 aaKnown RBP10.07□□□□□ -0.8
SRPRB-202ENST00000466636 SCLYQ96I15 445 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 HNRNPABQ99729 332 aaKnown RBP10.07□□□□□ -0.8
SRPRB-202ENST00000466636 RTP3Q9BQQ7 232 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.07□□□□□ -0.8
SRPRB-202ENST00000466636 CRTAC1Q9NQ79 661 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 RBM12Q9NTZ6 932 aaKnown RBP10.07□□□□□ -0.8
SRPRB-202ENST00000466636 TBC1D13Q9NVG8 400 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
SRPRB-202ENST00000466636 HESX1Q9UBX0 185 aa10.07□□□□□ -0.8
SRPRB-202ENST00000466636 GRXCR2A6NFK2 248 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 E5RJQ4 531 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 TMEM189-UBE2V1I3L0A0 370 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 I3L4J1 428 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 ITGB1P05556 798 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 ODC1P11926 461 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 KRT3P12035 628 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 H2AFXP16104 143 aaPredicted RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 TYMPP19971 482 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 ADORA2BP29275 332 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 CYP2C18P33260 490 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 RFC1P35251 1148 aaPredicted RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 RGS7P49802 495 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 LBX1P52954 281 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 TAS2R40P59535 323 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 RNASE9P60153 205 aaKnown RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 BST2Q10589 180 aaKnown RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 PAN2Q504Q3 1202 aaKnown RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 DCUN1D2Q6PH85 259 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 FAM183BPQ6ZVS7 135 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 PAQR9Q6ZVX9 377 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 FUKQ8N0W3 1084 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 FNIP1Q8TF40 1166 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 RSPH1Q8WYR4 309 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 VWCEQ96DN2 955 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 RNPC3Q96LT9 517 aaKnown RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 CASD1Q96PB1 797 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 SYT15Q9BQS2 421 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 MIS12Q9H081 205 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 C11orf49Q9H6J7 331 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 SYNCQ9H7C4 482 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 METTL5Q9NRN9 209 aaKnown RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 KANSL3Q9P2N6 904 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 CDH9Q9ULB4 789 aa10.06□□□□□ -0.8
SRPRB-202ENST00000466636 TIMM13Q9Y5L4 95 aaPredicted RBP10.06□□□□□ -0.8
SRPRB-202ENST00000466636 HTTP42858 3142 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 F8VP50 259 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 F8W810 466 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PAPSS1O43252 624 aaPredicted RBP10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PSTPIP1O43586 416 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 FGGP02679 453 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 RHOXF2BP0C7M4 288 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PYGMP11217 842 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 SCNN1AP37088 669 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PLA2G4AP47712 749 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 GATMP50440 423 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 RWDD2BP57060 319 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PLCB3Q01970 1234 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PIGHQ14442 188 aaPredicted RBP10.05□□□□□ -0.8
SRPRB-202ENST00000466636 MDH1BQ5I0G3 518 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 LRRC38Q5VT99 294 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 DAB2IPQ5VWQ8 1189 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 OR6B2Q6IFH4 312 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 AADACL2Q6P093 401 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 OLFML1Q6UWY5 402 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 RHOT1Q8IXI2 618 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 HASPINQ8TF76 798 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PIWIL1Q96J94 861 aaKnown RBP10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PNKPQ96T60 521 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 RHOXF2Q9BQY4 288 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 B3GNT5Q9BYG0 378 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PARD6BQ9BYG5 372 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 ST7Q9NRC1 585 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 DSEQ9UL01 958 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 RAB21Q9UL25 225 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 USTQ9Y2C2 406 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 ATP11BQ9Y2G3 1177 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PCDHB7Q9Y5E2 793 aa10.05□□□□□ -0.8
SRPRB-202ENST00000466636 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
SRPRB-202ENST00000466636 TARSL2A2RTX5 802 aaKnown RBP10.04□□□□□ -0.8
SRPRB-202ENST00000466636 MYBPHLA2RUH7 354 aa10.04□□□□□ -0.8
SRPRB-202ENST00000466636 CCDC188H7C350 402 aa10.04□□□□□ -0.8
SRPRB-202ENST00000466636 PIK3R2O00459 728 aa10.04□□□□□ -0.8
SRPRB-202ENST00000466636 CLDN5O00501 218 aa10.04□□□□□ -0.8
SRPRB-202ENST00000466636 XPO1O14980 1071 aaKnown RBP10.04□□□□□ -0.8
SRPRB-202ENST00000466636 HOXA2O43364 376 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms