RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 ZXDBP98169 803 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 NFE2Q16621 373 aaPredicted RBP15.56■□□□□ 0.08
CXCR4-203ENST00000466288 ARSHQ5FYA8 562 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 SPDYCQ5MJ68 293 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 C19orf48Q6RUI8 117 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 RAB44Q7Z6P3 723 aaPredicted RBP15.56■□□□□ 0.08
CXCR4-203ENST00000466288 SFTPA1Q8IWL2 248 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 LRRC15Q8TF66 581 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 LEO1Q8WVC0 666 aaPredicted RBP15.56■□□□□ 0.08
CXCR4-203ENST00000466288 ASB7Q9H672 318 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 FSCN3Q9NQT6 498 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 DPP3Q9NY33 737 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 KCND2Q9NZV8 630 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 NOL7Q9UMY1 257 aaKnown RBP15.56■□□□□ 0.08
CXCR4-203ENST00000466288 BPTFQ12830 3046 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 KIAA1549LQ6ZVL6 1849 aa15.56■□□□□ 0.08
CXCR4-203ENST00000466288 C2orf78A6NCI8 922 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 KPNA7A9QM74 516 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 MAP3K13O43283 966 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 NFATC1O95644 943 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 ITPKAP23677 461 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 CYP2F1P24903 491 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 TSPY1Q01534 308 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 ZRSR1Q15695 479 aaKnown RBP15.55■□□□□ 0.08
CXCR4-203ENST00000466288 MAP7D1Q3KQU3 841 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 PDZD3Q86UT5 571 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 IL17RCQ8NAC3 791 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 TXNDC5Q8NBS9 432 aaKnown RBP15.55■□□□□ 0.08
CXCR4-203ENST00000466288 WHAMMQ8TF30 809 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 SPACA7Q96KW9 195 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 ABCB6Q9NP58 842 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 ARHGAP26Q9UNA1 814 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 DENND4CQ5VZ89 1909 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 IGSF10Q6WRI0 2623 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 MYO16Q9Y6X6 1858 aa15.55■□□□□ 0.08
CXCR4-203ENST00000466288 ATXN2Q99700 1313 aaKnown RBP15.55■□□□□ 0.08
CXCR4-203ENST00000466288 SGK1O00141 431 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 LAD1O00515 517 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 PLA2G4BP0C869 781 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 RDXP35241 583 aaKnown RBP15.54■□□□□ 0.08
CXCR4-203ENST00000466288 HOXD12P35452 270 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 PRPHP41219 470 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 DPP6P42658 865 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 ACOT2P49753 483 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 RPL10AP62906 217 aaKnown RBP15.54■□□□□ 0.08
CXCR4-203ENST00000466288 MESP2Q0VG99 397 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 SCAPQ12770 1279 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 ZNF423Q2M1K9 1284 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 LYSMD4Q5XG99 296 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 DTHD1Q6ZMT9 781 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 HDDC3Q8N4P3 179 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 ALLCQ8N6M5 410 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 COL26A1Q96A83 441 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 PKMYT1Q99640 499 aa15.54■□□□□ 0.08
CXCR4-203ENST00000466288 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
CXCR4-203ENST00000466288 CFIP05156 583 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 HDCP19113 662 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 SV2CQ496J9 727 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 LMBRD2Q68DH5 695 aaPredicted RBP15.53■□□□□ 0.08
CXCR4-203ENST00000466288 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 KCTD17Q8N5Z5 321 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 IPO9Q96P70 1041 aaKnown RBP15.53■□□□□ 0.08
CXCR4-203ENST00000466288 PLIN2Q99541 437 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 ACBD6Q9BR61 282 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 GTPBP2Q9BX10 602 aaKnown RBP15.53■□□□□ 0.08
CXCR4-203ENST00000466288 CAPN10Q9HC96 672 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 SLC6A14Q9UN76 642 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 SCN1AP35498 2009 aa15.53■□□□□ 0.08
CXCR4-203ENST00000466288 ANKRD63C9JTQ0 380 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 KLF8O95600 359 aaPredicted RBP15.52■□□□□ 0.08
CXCR4-203ENST00000466288 CD59P13987 128 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 SCP2P22307 547 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 SLC6A11P48066 632 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 ATXN3P54252 364 aaPredicted RBP15.52■□□□□ 0.08
CXCR4-203ENST00000466288 GNL2Q13823 731 aaKnown RBP15.52■□□□□ 0.08
CXCR4-203ENST00000466288 CCDC142Q17RM4 750 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 DUOXA1Q1HG43 343 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 COL28A1Q2UY09 1125 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 HSF5Q4G112 596 aaPredicted RBP15.52■□□□□ 0.08
CXCR4-203ENST00000466288 INTS6LQ5JSJ4 861 aaKnown RBP15.52■□□□□ 0.08
CXCR4-203ENST00000466288 EMC10Q5UCC4 262 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 FIZ1Q96SL8 496 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 REEP2Q9BRK0 252 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 POLMQ9NP87 494 aaPredicted RBP15.52■□□□□ 0.08
CXCR4-203ENST00000466288 ODF2LQ9ULJ1 636 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 L1RE1Q9UN81 338 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 OBSL1O75147 1896 aa15.52■□□□□ 0.08
CXCR4-203ENST00000466288 TISP43B9A030 160 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 K7ENM7 598 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 OPHN1O60890 802 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 ADAM23O75077 832 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 CYP17A1P05093 508 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 SERPINF2P08697 491 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 ACAT1P24752 427 aaKnown RBP15.52■□□□□ 0.07
CXCR4-203ENST00000466288 TIE1P35590 1138 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 KIR2DL1P43626 348 aaPredicted RBP15.52■□□□□ 0.07
CXCR4-203ENST00000466288 NEK4P51957 841 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 ZNF131P52739 623 aa15.52■□□□□ 0.07
CXCR4-203ENST00000466288 KCNB1Q14721 858 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms