RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 ECT2Q9H8V3 914 aa14.49□□□□□ -0.09
CHD3-207ENST00000466233 GCNT4Q9P109 453 aa14.49□□□□□ -0.09
CHD3-207ENST00000466233 EBF1Q9UH73 591 aa14.49□□□□□ -0.09
CHD3-207ENST00000466233 MAGED2Q9UNF1 606 aaPredicted RBP14.49□□□□□ -0.09
CHD3-207ENST00000466233 DNAH14Q0VDD8 3507 aa14.49□□□□□ -0.09
CHD3-207ENST00000466233 GOLGA8IPA6NC78 632 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 OTOL1A6NHN0 477 aaPredicted RBP14.48□□□□□ -0.09
CHD3-207ENST00000466233 GOLGA8JA6NMD2 632 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 ACAT1P24752 427 aaKnown RBP14.48□□□□□ -0.09
CHD3-207ENST00000466233 ATICP31939 592 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 GJA4P35212 333 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 HOXD13P35453 343 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 RAP1GAPP47736 663 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 SPEM2Q0P670 501 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 PSMD6Q15008 389 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 SNRNP35Q16560 246 aaKnown RBP14.48□□□□□ -0.09
CHD3-207ENST00000466233 PRR23CQ6ZRP0 262 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 UNC13DQ70J99 1090 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 SYT13Q7L8C5 426 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 HS2ST1Q7LGA3 356 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 TRAPPC11Q7Z392 1133 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 OSTM1Q86WC4 334 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 GPIHBP1Q8IV16 184 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 PDILTQ8N807 584 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 GOLGA5Q8TBA6 731 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 MYCBPAPQ8TBZ2 947 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 SNX21Q969T3 373 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 ACDQ96AP0 544 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 C8orf48Q96LL4 319 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 DUSP9Q99956 384 aaKnown RBP14.48□□□□□ -0.09
CHD3-207ENST00000466233 SMG9Q9H0W8 520 aaKnown RBP14.48□□□□□ -0.09
CHD3-207ENST00000466233 VRTNQ9H8Y1 702 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 AGPAT3Q9NRZ7 376 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 DUS2Q9NX74 493 aaKnown RBP14.48□□□□□ -0.09
CHD3-207ENST00000466233 SLC8A2Q9UPR5 921 aa14.48□□□□□ -0.09
CHD3-207ENST00000466233 TGFB1I1O43294 461 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 OLFM2O95897 454 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 CKMP06732 381 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 HDCP19113 662 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 GNL1P36915 607 aaPredicted RBP14.47□□□□□ -0.09
CHD3-207ENST00000466233 GPR15P49685 360 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 GALK1P51570 392 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 AP3M2P53677 418 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 SLC7A9P82251 487 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 DMWDQ09019 674 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 PSMD2Q13200 908 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 KCNB1Q14721 858 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 EML3Q32P44 896 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 FAM26FQ5R3K3 315 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 DENND5BQ6ZUT9 1274 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 CEP68Q76N32 757 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 C11orf74Q86VG3 221 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 CBWD2Q8IUF1 395 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 FAM160A2Q8N612 972 aaPredicted RBP14.47□□□□□ -0.09
CHD3-207ENST00000466233 XXYLT1Q8NBI6 393 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 OR5B17Q8NGF7 314 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 FNBP1Q96RU3 617 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 CGRRF1Q99675 332 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 BACH2Q9BYV9 841 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 CRTAC1Q9NQ79 661 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 TRPM5Q9NZQ8 1165 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 TCHHQ07283 1943 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 DENND4CQ5VZ89 1909 aa14.47□□□□□ -0.09
CHD3-207ENST00000466233 SLC9A3R1O14745 358 aaPredicted RBP14.46□□□□□ -0.09
CHD3-207ENST00000466233 RPP40O75818 363 aaKnown RBP14.46□□□□□ -0.09
CHD3-207ENST00000466233 NFATC1O95644 943 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 ZNF806P0C7X5 589 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 LMO2P25791 158 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 ANXA13P27216 316 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 EIF2DP41214 584 aaKnown RBP14.46□□□□□ -0.09
CHD3-207ENST00000466233 IFNAR2P48551 515 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 ASIC1P78348 528 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 CLDN10P78369 228 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 CYP24A1Q07973 514 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 TRIM68Q6AZZ1 485 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 RIN3Q8TB24 985 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 OVCA2Q8WZ82 227 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 CD101Q93033 1021 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 ELOVL4Q9GZR5 314 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 C2orf42Q9NWW7 574 aa14.46□□□□□ -0.09
CHD3-207ENST00000466233 NCOR2Q9Y618 2525 aa14.46□□□□□ -0.1
CHD3-207ENST00000466233 PTPRJQ12913 1337 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 ZNF840PA6NDX5 716 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 EPN2O95208 641 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 EGFP01133 1207 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 ARSAP15289 507 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 TNNI1P19237 187 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 GRIK1P39086 918 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 HSF5Q4G112 596 aaPredicted RBP14.45□□□□□ -0.1
CHD3-207ENST00000466233 PLA2G2CQ5R387 149 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 SDHAF4Q5VUM1 108 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 SHC4Q6S5L8 630 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 DDX42Q86XP3 938 aaKnown RBP eCLIP14.45□□□□□ -0.1
CHD3-207ENST00000466233 SCN4BQ8IWT1 228 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 SH3RF2Q8TEC5 729 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 SCFD1Q8WVM8 642 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
CHD3-207ENST00000466233 SYAP1Q96A49 352 aaPredicted RBP14.45□□□□□ -0.1
CHD3-207ENST00000466233 PCED1BQ96HM7 432 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms