RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CALR3Q96L12 384 aaKnown RBP19.66■□□□□ 0.74
CAPN3-209ENST00000466222 RTP3Q9BQQ7 232 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 OSGEPQ9NPF4 335 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 TJP2Q9UDY2 1190 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 RRP15Q9Y3B9 282 aaKnown RBP19.66■□□□□ 0.74
CAPN3-209ENST00000466222 TANC1Q9C0D5 1861 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 ZBBXA8MT70 800 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 VDRP11473 427 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 SGO2Q562F6 1265 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 UNC93AQ86WB7 457 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 SYCE1Q8N0S2 351 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 ACTRT1Q8TDG2 376 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 TSPAN16Q9UKR8 245 aa19.66■□□□□ 0.74
CAPN3-209ENST00000466222 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.66■□□□□ 0.74
CAPN3-209ENST00000466222 M0QZQ0 153 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 HOXA2O43364 376 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 AMHP03971 560 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 ALDH2P05091 517 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 GALTP07902 379 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 FPGSQ05932 587 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 ABHD8Q96I13 439 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 SUSD3Q96L08 255 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 TMEM209Q96SK2 561 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.65■□□□□ 0.74
CAPN3-209ENST00000466222 GPR62Q9BZJ7 368 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 GOLPH3Q9H4A6 298 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 MARCH5Q9NX47 278 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 PCDHGC3Q9UN70 934 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 COG5Q9UP83 839 aa19.65■□□□□ 0.74
CAPN3-209ENST00000466222 ANKRD62A6NC57 917 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 MYO1CO00159 1063 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 TADA2AO75478 443 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 SKOR1P84550 965 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 CENPCQ03188 943 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 CNGA2Q16280 664 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 MMS22LQ6ZRQ5 1243 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 TTC30AQ86WT1 665 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 CRYBG2Q8N1P7 616 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 C11orf70Q9BRQ4 267 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 FAM107BQ9H098 131 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 EPB41L5Q9HCM4 733 aa19.64■□□□□ 0.74
CAPN3-209ENST00000466222 CCDC188H7C350 402 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 M0QYV0 167 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 CLDN5O00501 218 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 FGBP02675 491 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 GLI1P08151 1106 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 PFKMP08237 780 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 TMEM253P0C7T8 217 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 ODC1P11926 461 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 ADORA2BP29275 332 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 TKTP29401 623 aaKnown RBP19.64■□□□□ 0.73
CAPN3-209ENST00000466222 NSFP46459 744 aaKnown RBP19.64■□□□□ 0.73
CAPN3-209ENST00000466222 GOLGA7BQ2TAP0 167 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 MCOLN2Q8IZK6 566 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 TTC39CQ8N584 583 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 LRRC57Q8N9N7 239 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 TSEN2Q8NCE0 465 aaKnown RBP19.64■□□□□ 0.73
CAPN3-209ENST00000466222 B3GALNT2Q8NCR0 500 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 SLC35G2Q8TBE7 412 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 SLC2A14Q8TDB8 520 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 CTNNBL1Q8WYA6 563 aaPredicted RBP19.64■□□□□ 0.73
CAPN3-209ENST00000466222 ZNF689Q96CS4 500 aaPredicted RBP19.64■□□□□ 0.73
CAPN3-209ENST00000466222 CWH43Q9H720 699 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 CRTAC1Q9NQ79 661 aa19.64■□□□□ 0.73
CAPN3-209ENST00000466222 MYBPHLA2RUH7 354 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 CCDC85CA6NKD9 419 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 PIK3R2O00459 728 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 PTPN1P18031 435 aaKnown RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 GUCY2DQ02846 1103 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 PTP4A2Q12974 167 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 PTPROQ16827 1216 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 TMEM240Q5SV17 173 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 CFAP58Q5T655 872 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 MON1BQ7L1V2 547 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 TAS1R1Q7RTX1 841 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 LRRC43Q8N309 656 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 DPF3Q92784 378 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 KRT12Q99456 494 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 CAPS2Q9BXY5 557 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 MRPL9Q9BYD2 267 aaKnown RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 FAM124BQ9H5Z6 455 aaPredicted RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 RC3H2Q9HBD1 1191 aaKnown RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 GTF3C4Q9UKN8 822 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 ADAM28Q9UKQ2 775 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 CDH23Q9H251 3354 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 MED7O43513 233 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 GJB6O95452 261 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 RRM1P23921 792 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 GPD2P43304 727 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 NOP2P46087 812 aaKnown RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 RABGGTBP53611 331 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 PPIGQ13427 754 aaKnown RBP eCLIP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 CUL1Q13616 776 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 MDH1BQ5I0G3 518 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 LCLAT1Q6UWP7 414 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 FAM43BQ6ZT52 329 aaPredicted RBP19.63■□□□□ 0.73
CAPN3-209ENST00000466222 SLFN11Q7Z7L1 901 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 CEP57Q86XR8 500 aa19.63■□□□□ 0.73
CAPN3-209ENST00000466222 TMEM86AQ8N2M4 240 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms