RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 STILQ15468 1287 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 PTGISQ16647 500 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 PKDCCQ504Y2 493 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 CD99L2Q8TCZ2 262 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 FNIP1Q8TF40 1166 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 PPP1R10Q96QC0 940 aaKnown RBP19.23■□□□□ 0.67
COL9A3-205ENST00000466192 NFS1Q9Y697 457 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 A8MXQ7 604 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 E5RJQ4 531 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 TULP2O00295 520 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 THPOP40225 353 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 MAP3K21Q5TCX8 1036 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 REM2Q8IYK8 340 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-205ENST00000466192 FAM118BQ9BPY3 351 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 PPFIA2O75334 1257 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 LMO2P25791 158 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 LILRA4P59901 499 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 KRT17Q04695 432 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 SLC20A2Q08357 652 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 LRIG3Q6UXM1 1119 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 LIMS2Q7Z4I7 341 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 RCOR2Q8IZ40 523 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 GSTCDQ8NEC7 633 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 IPO4Q8TEX9 1081 aaKnown RBP19.22■□□□□ 0.67
COL9A3-205ENST00000466192 ACSF2Q96CM8 615 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-205ENST00000466192 SLITRK1Q96PX8 696 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 DCLK3Q9C098 648 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 CENPHQ9H3R5 247 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 CHST12Q9NRB3 414 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 LRCH4O75427 683 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 KRT1P04264 644 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 PDGFRBP09619 1106 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 LRPAP1P30533 357 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 RGS7P49802 495 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 AFF1P51825 1210 aaKnown RBP19.22■□□□□ 0.67
COL9A3-205ENST00000466192 ADCY2Q08462 1091 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 SV2CQ496J9 727 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 FAM102AQ5T9C2 384 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-205ENST00000466192 PMF1Q6P1K2 205 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 MFSD7Q6UXD7 560 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 LPPQ93052 612 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 PIWIL1Q96J94 861 aaKnown RBP19.22■□□□□ 0.67
COL9A3-205ENST00000466192 TXLNGYQ9BZA5 131 aa19.22■□□□□ 0.67
COL9A3-205ENST00000466192 GOLGA6L10A6NI86 522 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 IGFBP6P24592 240 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-205ENST00000466192 GNL1P36915 607 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-205ENST00000466192 MLH1P40692 756 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 SLC25A11Q02978 314 aaKnown RBP19.21■□□□□ 0.67
COL9A3-205ENST00000466192 ZNF844Q08AG5 666 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 KAZNQ674X7 775 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 FAM183BPQ6ZVS7 135 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 PCSK9Q8NBP7 692 aaKnown RBP19.21■□□□□ 0.67
COL9A3-205ENST00000466192 APPL2Q8NEU8 664 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 RAPGEF5Q92565 580 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 SLCO2A1Q92959 643 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 RBM41Q96IZ5 413 aaKnown RBP19.21■□□□□ 0.67
COL9A3-205ENST00000466192 CCDC114Q96M63 670 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 CFHR5Q9BXR6 569 aa19.21■□□□□ 0.67
COL9A3-205ENST00000466192 DDX20Q9UHI6 824 aaKnown RBP19.21■□□□□ 0.67
COL9A3-205ENST00000466192 RPLP2P05387 115 aaKnown RBP19.2■□□□□ 0.66
COL9A3-205ENST00000466192 KRT10P13645 584 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 GBP1P32455 592 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 ARHGAP17Q68EM7 881 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 CRYBG2Q8N1P7 616 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 SLC35F5Q8WV83 523 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 GAD1Q99259 594 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 TRMT13Q9NUP7 481 aaKnown RBP19.2■□□□□ 0.66
COL9A3-205ENST00000466192 CACNG4Q9UBN1 327 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 PADI3Q9ULW8 664 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 TDRD15B5MCY1 1934 aaKnown RBP19.2■□□□□ 0.66
COL9A3-205ENST00000466192 GPR182O15218 404 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 IL1R2P27930 398 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 CD52P31358 61 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 ITGA7Q13683 1181 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 TRIP13Q15645 432 aaPredicted RBP19.2■□□□□ 0.66
COL9A3-205ENST00000466192 OR6B2Q6IFH4 312 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 TRNP1Q6NT89 227 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 SPOCD1Q6ZMY3 1216 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 POLNQ7Z5Q5 900 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 SLC4A5Q9BY07 1137 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 MIOSQ9NXC5 875 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 MTRF1LQ9UGC7 380 aaKnown RBP19.2■□□□□ 0.66
COL9A3-205ENST00000466192 ASIC3Q9UHC3 531 aa19.2■□□□□ 0.66
COL9A3-205ENST00000466192 HUS1O60921 280 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 GABBR2O75899 941 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 MYZAPP0CAP1 466 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 GHRP10912 638 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 CCDC130P13994 396 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 PMS2P54278 862 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 PDE4CQ08493 712 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 ODF2Q5BJF6 829 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 ART4Q93070 314 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 ATP6V1G3Q96LB4 118 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 SNX25Q9H3E2 840 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 TMBIM4Q9HC24 238 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 CREBZFQ9NS37 354 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 DDX56Q9NY93 547 aaKnown RBP19.19■□□□□ 0.66
COL9A3-205ENST00000466192 HESX1Q9UBX0 185 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 MGEA5O60502 916 aa19.19■□□□□ 0.66
COL9A3-205ENST00000466192 SETSIPP0DME0 302 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms