RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ZMIZ2Q8NF64 920 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 ZNF461Q8TAF7 563 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 SPPL2BQ8TCT7 592 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 PGLYRP2Q96PD5 576 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 SMOQ99835 787 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 EMILIN2Q9BXX0 1053 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 LHX5Q9H2C1 402 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 PRDM12Q9H4Q4 367 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 CSNK1G1Q9HCP0 422 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 KRT82Q9NSB4 513 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
VCP-204ENST00000466100 HSFX1Q9UBD0 423 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 AFF4Q9UHB7 1163 aaKnown RBP11.81□□□□□ -0.52
VCP-204ENST00000466100 CYTH4Q9UIA0 394 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 FBXW11Q9UKB1 542 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
VCP-204ENST00000466100 ANAPC1Q9H1A4 1944 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 M0QYV0 167 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 TULP2O00295 520 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 TGM5O43548 720 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 CLASP2O75122 1294 aaKnown RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 AP1G2O75843 785 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 BEST1O76090 585 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 SEC24AO95486 1093 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 LSM8O95777 96 aaKnown RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 CYP1A1P04798 512 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 FAM200BP0CF97 657 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 HAPLN1P10915 354 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 UNGP13051 313 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 NPR3P17342 541 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 POU3F3P20264 500 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 BDNFP23560 247 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 CYP2F1P24903 491 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 BCAT1P54687 386 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 ARPP19P56211 112 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 NOMO3P69849 1222 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 CCZ1BP86790 482 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 CCZ1P86791 482 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 KCNC3Q14003 757 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 BMS1Q14692 1282 aaKnown RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 CLEC16AQ2KHT3 1053 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 TRIM72Q6ZMU5 477 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 SPATA2LQ8IUW3 424 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 LRRC8AQ8IWT6 810 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 TCEAL8Q8IYN2 117 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 SLC22A17Q8WUG5 538 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 SMARCD1Q96GM5 515 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 DUSP16Q9BY84 665 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 KCNF1Q9H3M0 494 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 NHEJ1Q9H9Q4 299 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 ABI2Q9NYB9 513 aaPredicted RBP11.8□□□□□ -0.52
VCP-204ENST00000466100 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 MAFFQ9ULX9 164 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 ATP8B3O60423 1300 aa11.8□□□□□ -0.52
VCP-204ENST00000466100 A0A087X0T9 212 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 SOWAHDA6NJG2 315 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 HHLA1C9JL84 531 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 GABBR2O75899 941 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 LCA5LO95447 670 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 FAM228BP0C875 321 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 SETSIPP0DME0 302 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 CA8P35219 290 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
VCP-204ENST00000466100 KIF11P52732 1056 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 CENPCQ03188 943 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 PDE4CQ08493 712 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 ADCY1Q08828 1119 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 BST2Q10589 180 aaKnown RBP11.79□□□□□ -0.52
VCP-204ENST00000466100 DUSP4Q13115 394 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 ADGRE1Q14246 886 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 MTF1Q14872 753 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 PTPROQ16827 1216 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 DUSP6Q16828 381 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
VCP-204ENST00000466100 ZNF697Q5TEC3 545 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 VSTM1Q6UX27 236 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 RAD9BQ6WBX8 426 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 TMTC1Q8IUR5 882 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 PASD1Q8IV76 773 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 C1orf131Q8NDD1 294 aaKnown RBP11.79□□□□□ -0.52
VCP-204ENST00000466100 UBA3Q8TBC4 463 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 MICAL1Q8TDZ2 1067 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 SLC35F5Q8WV83 523 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 SECISBP2LQ93073 1101 aaKnown RBP11.79□□□□□ -0.52
VCP-204ENST00000466100 C8orf48Q96LL4 319 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 MED10Q9BTT4 135 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 TAS2R14Q9NYV8 317 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 HESX1Q9UBX0 185 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 UNC80Q8N2C7 3258 aa11.79□□□□□ -0.52
VCP-204ENST00000466100 F8VP50 259 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 TNFRSF10BO14763 440 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 ZNF263O14978 683 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 XPO1O14980 1071 aaKnown RBP11.78□□□□□ -0.52
VCP-204ENST00000466100 SOAT2O75908 522 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 PAPLNO95428 1278 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 GLUD1P00367 558 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 EPCAMP16422 314 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms