RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ETNPPLQ8TBG4 499 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 CCDC12Q8WUD4 166 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 HERVK_113Q902F9 699 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 HAS1Q92839 578 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 SLC5A5Q92911 643 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 ATP6V0A1Q93050 837 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 TRMT2BQ96GJ1 504 aaKnown RBP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 CDHR1Q96JP9 859 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 MBOAT7Q96N66 472 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 GUCD1Q96NT3 240 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 SH2D3AQ9BRG2 576 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 ZNF577Q9BSK1 485 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 KATNAL1Q9BW62 490 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 SEZ6LQ9BYH1 1024 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 GLT8D2Q9H1C3 349 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 UNC45AQ9H3U1 944 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 PCDH18Q9HCL0 1135 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 WRAP73Q9P2S5 460 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 PRKAG3Q9UGI9 489 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 CNOT11Q9UKZ1 510 aaKnown RBP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 LIMCH1Q9UPQ0 1083 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 EMSYQ7Z589 1322 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 MBLAC1A4D2B0 266 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 CHMP2AO43633 222 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 STBD1O95210 358 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 FGBP02675 491 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 CHRNA1P02708 482 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 CXCL10P02778 98 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 MMP1P03956 469 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 LCP1P13796 627 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 ERCC5P28715 1186 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 THPOP40225 353 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 GFRA1P56159 465 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 PPFIA1Q13136 1202 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 NONOQ15233 471 aaKnown RBP eCLIP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 TESK1Q15569 626 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 CR1LQ2VPA4 569 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 LETM2Q2VYF4 491 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 Q4G0T1 1027 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 PRR31Q5SQ13 230 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 ACBD5Q5T8D3 534 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 PSRC1Q6PGN9 363 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 LRRC8DQ7L1W4 858 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 ZC3H18Q86VM9 953 aaKnown RBP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 DEFB123Q8N688 67 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 GIMAP8Q8ND71 665 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 CAGE1Q8TC20 777 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 BICD2Q8TD16 824 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 AFAP1L1Q8TED9 768 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 DNAJB3Q8WWF6 145 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 GLG1Q92896 1179 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 TMEM169Q96HH4 297 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 CEP89Q96ST8 783 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 RBM15Q96T37 977 aaKnown RBP eCLIP5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 KCNMB3Q9NPA1 279 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 MTMR10Q9NXD2 777 aa5.4□□□□□ -1.54
EXOSC3-204ENST00000465860 FNDC1Q4ZHG4 1894 aaPredicted RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 A0A087WWV3 80 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 LCHNA4D1U4 455 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 EPOPA6NHQ4 379 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 RSPH10B2B2RC85 870 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 CDKL5O76039 1030 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 CPP00450 1065 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 ITGB3P05106 788 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 RSPH10BP0C881 870 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 KRT2P35908 639 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 KCNJ6P48051 423 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 STAT5BP51692 787 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 WDR5P61964 334 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 SMAD3P84022 425 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 SPIRE1Q08AE8 756 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 MGAT3Q09327 533 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 BFSP2Q13515 415 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 LRCH2Q5VUJ6 765 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 CPLX2Q6PUV4 134 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.39□□□□□ -1.557e-8■■□□□ 12.7
EXOSC3-204ENST00000465860 PLPPR4Q7Z2D5 763 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 PPIL6Q8IXY8 311 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 DIS3L2Q8IYB7 885 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 TMEM145Q8NBT3 493 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 DBF4BQ8NFT6 615 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 C1orf159Q96HA4 380 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 TMX3Q96JJ7 454 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 ZNF668Q96K58 619 aaPredicted RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 CCDC140Q96MF4 163 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 SDF4Q9BRK5 362 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 FTOQ9C0B1 505 aaKnown RBP eCLIP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM49AQ9H0Q0 323 aaPredicted RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 TMEM60Q9H2L4 133 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 SMARCAD1Q9H4L7 1026 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 AGO3Q9H9G7 860 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 ZNF302Q9NR11 478 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 TBC1D22BQ9NU19 505 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 ERAP1Q9NZ08 941 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 GABBR1Q9UBS5 961 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 DDX25Q9UHL0 483 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 TUBE1Q9UJT0 475 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 ZNF215Q9UL58 517 aaPredicted RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 PCDHA2Q9Y5H9 948 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms