RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 C12orf65Q9H3J6 166 aaKnown RBP20.66■□□□□ 0.9
SDF4-205ENST00000465727 ZWILCHQ9H900 591 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 ARMCX1Q9P291 453 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 SPAG6O75602 509 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 GH2P01242 217 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 PABPC4LP0CB38 370 aaKnown RBP20.65■□□□□ 0.9
SDF4-205ENST00000465727 GNA15P30679 374 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 CLDN10P78369 228 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 XIAPP98170 497 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 LSAMPQ13449 338 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 MSS51Q4VC12 460 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 FAM102BQ5T8I3 360 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 SH2D5Q6ZV89 423 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 LBHD1Q9BQE6 289 aaPredicted RBP20.65■□□□□ 0.9
SDF4-205ENST00000465727 DEFB129Q9H1M3 183 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 C17orf75Q9HAS0 396 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 GPRC5CQ9NQ84 441 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 STK32BQ9NY57 414 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 ATXN10Q9UBB4 475 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 PPME1Q9Y570 386 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 IVNS1ABPQ9Y6Y0 642 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 FAM237BA0A1B0GVD1 139 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 ACO1P21399 889 aaKnown RBP20.65■□□□□ 0.9
SDF4-205ENST00000465727 NPTX2P47972 431 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 C1orf146Q5VVC0 180 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 SLC44A1Q8WWI5 657 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 SPIRE2Q8WWL2 714 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 ELMO3Q96BJ8 720 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 DDX50Q9BQ39 737 aaKnown RBP20.65■□□□□ 0.9
SDF4-205ENST00000465727 WDR83Q9BRX9 315 aaKnown RBP20.65■□□□□ 0.9
SDF4-205ENST00000465727 TMCO1Q9UM00 188 aa20.65■□□□□ 0.9
SDF4-205ENST00000465727 PPEF1O14829 653 aaPredicted RBP20.64■□□□□ 0.89
SDF4-205ENST00000465727 ENO1P06733 434 aaKnown RBP20.64■□□□□ 0.89
SDF4-205ENST00000465727 RPL26P61254 145 aaKnown RBP20.64■□□□□ 0.89
SDF4-205ENST00000465727 TAP1Q03518 808 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 ATG16L1Q676U5 607 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 SLC39A4Q6P5W5 647 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 ALYREFQ86V81 257 aaKnown RBP20.64■□□□□ 0.89
SDF4-205ENST00000465727 PASD1Q8IV76 773 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 MTBPQ96DY7 904 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 NTPCRQ9BSD7 190 aaKnown RBP20.64■□□□□ 0.89
SDF4-205ENST00000465727 IQCGQ9H095 443 aaKnown RBP20.64■□□□□ 0.89
SDF4-205ENST00000465727 NDUFA13Q9P0J0 144 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 SLC7A8Q9UHI5 535 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 ZNRF3Q9ULT6 936 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 SORCS3Q9UPU3 1222 aa20.64■□□□□ 0.89
SDF4-205ENST00000465727 CALB1P05937 261 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 INHBAP08476 426 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 MMP8P22894 467 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 CACNB3P54284 484 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 PIGHQ14442 188 aaPredicted RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 ZACNQ401N2 412 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 PABPC1LQ4VXU2 614 aaKnown RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 FAM182BQ5T319 152 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 ANKRD22Q5VYY1 191 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 PIP4K2CQ8TBX8 421 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 APBB2Q92870 758 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 SERAC1Q96JX3 654 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 UBE2OQ9C0C9 1292 aaKnown RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 KMT5AQ9NQR1 393 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 ANKEF1Q9NU02 776 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 PHF24Q9UPV7 400 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 CNTN6Q9UQ52 1028 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 ASTN2O75129 1339 aaPredicted RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 CSDE1O75534 798 aaKnown RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 SERPINB2P05120 415 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 CPA2P48052 419 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 RPL7AP62424 266 aaKnown RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 ZNF200P98182 395 aaPredicted RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 POLNQ7Z5Q5 900 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 TREML1Q86YW5 311 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 OR6Y1Q8NGX8 325 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 RAB3IL1Q8TBN0 382 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 GINM1Q9NU53 330 aa20.63■□□□□ 0.89
SDF4-205ENST00000465727 PPARGC1AQ9UBK2 798 aaKnown RBP20.63■□□□□ 0.89
SDF4-205ENST00000465727 SMIM31A0A1B0GVY4 71 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 C2orf71A6NGG8 1288 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 BUD23O43709 281 aaKnown RBP20.62■□□□□ 0.89
SDF4-205ENST00000465727 TCF4P15884 667 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 STIP1P31948 543 aaKnown RBP20.62■□□□□ 0.89
SDF4-205ENST00000465727 MAP3K10Q02779 954 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 ASPHQ12797 758 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 CUL2Q13617 745 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 PTF1AQ7RTS3 328 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 NIPA2Q8N8Q9 360 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 HAUS1Q96CS2 278 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 TTC1Q99614 292 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 THTPAQ9BU02 230 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 EPB41L1Q9H4G0 881 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 AGO4Q9HCK5 861 aaKnown RBP20.62■□□□□ 0.89
SDF4-205ENST00000465727 TBC1D22BQ9NU19 505 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 SSX2IPQ9Y2D8 614 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 LY75O60449 1722 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 COPEO14579 308 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 HLA-DRAP01903 254 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 CFHP08603 1231 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 PYGBP11216 843 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 PSMC5P62195 406 aa20.62■□□□□ 0.89
SDF4-205ENST00000465727 GAD2Q05329 585 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms