RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 CYP2U1Q7Z449 544 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 USP33Q8TEY7 942 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 ZNF560Q96MR9 790 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 CYP2S1Q96SQ9 504 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 KIF2CQ99661 725 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 ST6GALNAC4Q9H4F1 302 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 TMEM9BQ9NQ34 198 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 UXTQ9UBK9 157 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 AGO2Q9UKV8 859 aaKnown RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 INVSQ9Y283 1065 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 ADAMTS20P59510 1910 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 TRAV19A0A0A6YYK7 116 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 TMEM8BA6NDV4 472 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.38
CNOT4-208ENST00000465721 CEACAM1P13688 526 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 TCF3P15923 654 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 PLCG1P19174 1290 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 ACAT1P24752 427 aaKnown RBP12.65□□□□□ -0.38
CNOT4-208ENST00000465721 ADSSP30520 456 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 ABCD1P33897 745 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 OPRD1P41143 372 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 RPL10AP62906 217 aaKnown RBP12.65□□□□□ -0.38
CNOT4-208ENST00000465721 PSMD2Q13200 908 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 COL9A2Q14055 689 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-208ENST00000465721 DHX8Q14562 1220 aaKnown RBP12.65□□□□□ -0.38
CNOT4-208ENST00000465721 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 ANO7Q6IWH7 933 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 C1orf127Q8N9H9 656 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 MDGA1Q8NFP4 955 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 OLIG1Q8TAK6 271 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 SH3RF2Q8TEC5 729 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 RAD54LQ92698 747 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
CNOT4-208ENST00000465721 AK8Q96MA6 479 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 ACBD6Q9BR61 282 aa12.65□□□□□ -0.38
CNOT4-208ENST00000465721 PTPRBP23467 1997 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 K7EQS6 105 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 KHNYNO15037 678 aaKnown RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 HCRTO43612 131 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 PPP1R37O75864 691 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 IL18RAPO95256 599 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 KRT18P05783 430 aaKnown RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 HNRNPLP14866 589 aaKnown RBP eCLIP12.64□□□□□ -0.391e-5■■■□□ 17.9
CNOT4-208ENST00000465721 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 POLR2BP30876 1174 aaKnown RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 PNPLA4P41247 253 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 ZXDBP98169 803 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 CFAP221Q4G0U5 840 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 USP39Q53GS9 565 aaKnown RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 SLFN12LQ6IEE8 588 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 OSTM1Q86WC4 334 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 BRSK2Q8IWQ3 736 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 ARL14EPQ8N8R7 260 aaPredicted RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 TTC16Q8NEE8 873 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 CALML4Q96GE6 196 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 FAM84AQ96KN4 292 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 SCNM1Q9BWG6 230 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 LINC00597Q9H2U6 94 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 ZHX3Q9H4I2 956 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 DDX43Q9NXZ2 648 aaKnown RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 EVLQ9UI08 416 aaPredicted RBP12.64□□□□□ -0.39
CNOT4-208ENST00000465721 MMP17Q9ULZ9 603 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 ARHGAP26Q9UNA1 814 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 PLXNB3Q9ULL4 1909 aa12.64□□□□□ -0.39
CNOT4-208ENST00000465721 NFATC1O95644 943 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 ITGB3P05106 788 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 SEC13P55735 322 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 IRX4P78413 519 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 MYL7Q01449 175 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 GRIN1Q05586 938 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 KCNB1Q14721 858 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 C2orf27AQ580R0 203 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 TMEM86AQ8N2M4 240 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 LRRC52Q8N7C0 313 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 ZSWIM2Q8NEG5 633 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 DEFB124Q8NES8 71 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 CCDC26Q8TAB7 109 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 POMGNT1Q8WZA1 660 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 LARP4BQ92615 738 aaKnown RBP12.63□□□□□ -0.39
CNOT4-208ENST00000465721 HVCN1Q96D96 273 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
CNOT4-208ENST00000465721 STRA6Q9BX79 667 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 GDAP2Q9NXN4 497 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
CNOT4-208ENST00000465721 KNL1Q8NG31 2342 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
CNOT4-208ENST00000465721 GABRDO14764 452 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 EIF5BO60841 1220 aaKnown RBP12.62□□□□□ -0.39
CNOT4-208ENST00000465721 HUS1O60921 280 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 CYP17A1P05093 508 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 UBA7P41226 1012 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 P2RY2P41231 377 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 MAGEA11P43364 429 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms