RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-202ENST00000465601 SLC2A14Q8TDB8 520 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 FGF13Q92913 245 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 MCRS1Q96EZ8 462 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 HEXIM2Q96MH2 286 aaKnown RBP13.16□□□□□ -0.3
CHPF2-202ENST00000465601 VPS16Q9H269 839 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHPF2-202ENST00000465601 CDH7Q9ULB5 785 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 MAGED2Q9UNF1 606 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-202ENST00000465601 ANAPC1Q9H1A4 1944 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 GTPBP10A4D1E9 387 aaKnown RBP13.15□□□□□ -0.3
CHPF2-202ENST00000465601 SLC38A8A6NNN8 435 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 F8VP50 259 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 DLL1O00548 723 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 CSH1P0DML2 217 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 CSH2P0DML3 217 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 LAMP2P13473 410 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.3
CHPF2-202ENST00000465601 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
CHPF2-202ENST00000465601 PON1P27169 355 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 ANXA13P27216 316 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 GABRR2P28476 465 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 ADORA2BP29275 332 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 ZNF165P49910 485 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 YWHAEP62258 255 aaKnown RBP13.15□□□□□ -0.3
CHPF2-202ENST00000465601 APBA1Q02410 837 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 TRIM65Q6PJ69 517 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 POTEHQ6S545 545 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.3
CHPF2-202ENST00000465601 UBR7Q8N806 425 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 LEMD2Q8NC56 503 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 SHKBP1Q8TBC3 707 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 TMEM176AQ96HP8 235 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 KREMEN1Q96MU8 473 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 KCNK16Q96T55 309 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 BPIFA3Q9BQP9 254 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 HSD3B7Q9H2F3 369 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 FAM124BQ9H5Z6 455 aaPredicted RBP13.15□□□□□ -0.3
CHPF2-202ENST00000465601 UBE2TQ9NPD8 197 aaPredicted RBP13.15□□□□□ -0.3
CHPF2-202ENST00000465601 PCDHB4Q9Y5E5 795 aa13.15□□□□□ -0.3
CHPF2-202ENST00000465601 ATP8B3O60423 1300 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 A0A1W2PRU2 124 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 SMTNL1A8MU46 457 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 RNF225M0QZC1 329 aaPredicted RBP13.14□□□□□ -0.31
CHPF2-202ENST00000465601 TRIM66O15016 1216 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 AP1G2O75843 785 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 ASGR2P07307 311 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 ZNF18P17022 549 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 TRIM21P19474 475 aaKnown RBP13.14□□□□□ -0.31
CHPF2-202ENST00000465601 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
CHPF2-202ENST00000465601 GCNT1Q02742 428 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 TEAD2Q15562 447 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 PPP1R26Q5T8A7 1209 aaPredicted RBP13.14□□□□□ -0.31
CHPF2-202ENST00000465601 TMEM270Q6UE05 265 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 GAREM2Q75VX8 874 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 KHSRPQ92945 711 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHPF2-202ENST00000465601 SMARCD1Q96GM5 515 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 SPATA17Q96L03 361 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 C8orf48Q96LL4 319 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 HNRNPABQ99729 332 aaKnown RBP13.14□□□□□ -0.31
CHPF2-202ENST00000465601 ATXN3LQ9H3M9 355 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 IL21Q9HBE4 155 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 KRT82Q9NSB4 513 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 LIMA1Q9UHB6 759 aaKnown RBP13.14□□□□□ -0.31
CHPF2-202ENST00000465601 OBSL1O75147 1896 aa13.14□□□□□ -0.31
CHPF2-202ENST00000465601 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 BEST1O76090 585 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 NOL4O94818 638 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 MICAL2O94851 1124 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 TPM2P07951 284 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 ATP1A3P13637 1013 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
CHPF2-202ENST00000465601 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 USP46P62068 366 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 IQCB1Q15051 598 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 ARHGAP44Q17R89 818 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 ZMIZ2Q8NF64 920 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 ANKRD20A12PQ8NF67 263 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 RSAD2Q8WXG1 361 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 ZSWIM3Q96MP5 696 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 SMOQ99835 787 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 SIX2Q9NPC8 291 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 MUTYHQ9UIF7 546 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 ZFP37Q9Y6Q3 630 aaPredicted RBP13.13□□□□□ -0.31
CHPF2-202ENST00000465601 TECTAO75443 2155 aa13.13□□□□□ -0.31
CHPF2-202ENST00000465601 F5P12259 2224 aa13.12□□□□□ -0.31
CHPF2-202ENST00000465601 BECN2A8MW95 431 aa13.12□□□□□ -0.31
CHPF2-202ENST00000465601 FGF19O95750 216 aa13.12□□□□□ -0.31
CHPF2-202ENST00000465601 CALCAP01258 141 aa13.12□□□□□ -0.31
CHPF2-202ENST00000465601 F11P03951 625 aa13.12□□□□□ -0.31
CHPF2-202ENST00000465601 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms