RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 BDNFP23560 247 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 CNR2P34972 360 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 GALK1P51570 392 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 CYP2J2P51589 502 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 SNRPFP62306 86 aaKnown RBP22.31■■□□□ 1.16
CSPG5-204ENST00000465441 GRSF1Q12849 480 aaKnown RBP eCLIP22.31■■□□□ 1.16
CSPG5-204ENST00000465441 PSMD6Q15008 389 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 LAIR1Q6GTX8 287 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 PKN3Q6P5Z2 889 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 ARL14EPQ8N8R7 260 aaPredicted RBP22.31■■□□□ 1.16
CSPG5-204ENST00000465441 XXYLT1Q8NBI6 393 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 ZNF516Q92618 1163 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 MYLPFQ96A32 169 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 CCDC127Q96BQ5 260 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 FNBP1Q96RU3 617 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 MRPL45Q9BRJ2 306 aaKnown RBP22.31■■□□□ 1.16
CSPG5-204ENST00000465441 MAGEF1Q9HAY2 307 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 SLC39A2Q9NP94 309 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 GCNT4Q9P109 453 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 NME7Q9Y5B8 376 aa22.31■■□□□ 1.16
CSPG5-204ENST00000465441 TRAV19A0A0A6YYK7 116 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 F13A1P00488 732 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 PDIA4P13667 645 aaKnown RBP22.3■■□□□ 1.16
CSPG5-204ENST00000465441 HOXA6P31267 233 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 GNL1P36915 607 aaPredicted RBP22.3■■□□□ 1.16
CSPG5-204ENST00000465441 GRIK1P39086 918 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 AFMP43652 599 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 AMPD2Q01433 879 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 CYP27A1Q02318 531 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 CYP24A1Q07973 514 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 SPEM2Q0P670 501 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 CUL4BQ13620 913 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 MTF1Q14872 753 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 PDGFRLQ15198 375 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 VSTM1Q6UX27 236 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 FSIP1Q8NA03 581 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 SPATA17Q96L03 361 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 CGRRF1Q99675 332 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 FAM13BQ9NYF5 915 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 OBSL1O75147 1896 aa22.3■■□□□ 1.16
CSPG5-204ENST00000465441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.29■■□□□ 1.16
CSPG5-204ENST00000465441 PVALEFA0A1B0GWK0 134 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 C2orf78A6NCI8 922 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 PRR5-ARHGAP8B1AHC4 643 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 RETP07949 1114 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 FAM163BP0C2L3 166 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 HDCP19113 662 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 GJA4P35212 333 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 ATXN1P54253 815 aaKnown RBP22.29■■□□□ 1.16
CSPG5-204ENST00000465441 ARHGAP8P85298 464 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 MAPRE1Q15691 268 aaKnown RBP22.29■■□□□ 1.16
CSPG5-204ENST00000465441 ZNF77Q15935 545 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 WDR5BQ86VZ2 330 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 TTC16Q8NEE8 873 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 MYCBPAPQ8TBZ2 947 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 OSCP1Q8WVF1 389 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 PCED1BQ96HM7 432 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 ECT2Q9H8V3 914 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 DUS2Q9NX74 493 aaKnown RBP22.29■■□□□ 1.16
CSPG5-204ENST00000465441 UBE4BO95155 1302 aa22.29■■□□□ 1.16
CSPG5-204ENST00000465441 WDR87Q6ZQQ6 2873 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 FRYLO94915 3013 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 TACC1O75410 805 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 EGFP01133 1207 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 CKMP06732 381 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 SDHBP21912 280 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 ME1P48163 572 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 USP46P62068 366 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 LMNB2Q03252 620 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 BMT2Q1RMZ1 405 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 WDR72Q3MJ13 1102 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 RESP18Q5W5W9 173 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 DENND5BQ6ZUT9 1274 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 HS2ST1Q7LGA3 356 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 OR6B3Q8NGW1 331 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 GZF1Q9H116 711 aaPredicted RBP22.28■■□□□ 1.16
CSPG5-204ENST00000465441 LINC00597Q9H2U6 94 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 SNX25Q9H3E2 840 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 DMXL1Q9Y485 3027 aa22.28■■□□□ 1.16
CSPG5-204ENST00000465441 ATG13O75143 517 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 KNOP1Q1ED39 458 aaKnown RBP22.27■■□□□ 1.16
CSPG5-204ENST00000465441 MDH1BQ5I0G3 518 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 NAIF1Q69YI7 327 aaPredicted RBP22.27■■□□□ 1.16
CSPG5-204ENST00000465441 HSCBQ8IWL3 235 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 C12orf56Q8IXR9 622 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 SH3RF2Q8TEC5 729 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 CEP295NLQ96MC4 621 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 P2RY13Q9BPV8 354 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 CGNQ9P2M7 1197 aaKnown RBP22.27■■□□□ 1.16
CSPG5-204ENST00000465441 SERTAD1Q9UHV2 236 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 WNT6Q9Y6F9 365 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 ATG2BQ96BY7 2078 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 DNAH14Q0VDD8 3507 aa22.27■■□□□ 1.16
CSPG5-204ENST00000465441 RNF40O75150 1001 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 HSP90AA1P07900 732 aaKnown RBP22.26■■□□□ 1.15
CSPG5-204ENST00000465441 PTPN1P18031 435 aaKnown RBP22.26■■□□□ 1.15
CSPG5-204ENST00000465441 DRD1P21728 446 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 ANXA13P27216 316 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 IFNAR2P48551 515 aa22.26■■□□□ 1.15
CSPG5-204ENST00000465441 PXNP49023 591 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms