RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ISLR2Q6UXK2 745 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ENOSF1Q7L5Y1 443 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF677Q86XU0 584 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 PHF13Q86YI8 300 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ARID3BQ8IVW6 561 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 OR5B17Q8NGF7 314 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 LRRN4Q8WUT4 740 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 CEP170P1Q96L14 293 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 SLC13A1Q9BZW2 595 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 HAPLN2Q9GZV7 340 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 IRAK4Q9NWZ3 460 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 XPO7Q9UIA9 1087 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 RNASEH1O60930 286 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 DNAJC6O75061 913 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 TOP3BO95985 862 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ITGAVP06756 1048 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 BRD2P25440 801 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 GTF2H1P32780 548 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 PHBP35232 272 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ALDH18A1P54886 795 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 DRICH1Q6PGQ1 229 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 PPIL6Q8IXY8 311 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ZFAND2BQ8WV99 257 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 UBE2OQ9C0C9 1292 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 C20orf27Q9GZN8 174 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF212Q9UDV6 495 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 TCEAL9Q9UHQ7 104 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 AGTPBP1Q9UPW5 1226 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 TCRBV9S1A1TA0A576 114 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 SPATA31D3P0C874 917 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 DHRS4L1P0CG22 281 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 MMP8P22894 467 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 IL1R2P27930 398 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 BPIFB4P59827 614 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 TAF5Q15542 800 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 AOC3Q16853 763 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 SPATA31D4Q6ZUB0 917 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 USP6NLQ92738 828 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 NKD2Q969F2 451 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 TIPINQ9BVW5 301 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 SCINQ9Y6U3 715 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF862O60290 1169 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 PYGLP06737 847 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 YWHAGP61981 247 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 MCL1Q07820 350 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 KRT72Q14CN4 511 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 CNPY1Q3B7I2 92 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 SH2D5Q6ZV89 423 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 SCUBE1Q8IWY4 988 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 C4orf19Q8IY42 314 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 RSAD2Q8WXG1 361 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 EBF3Q9H4W6 596 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 PCSK1NQ9UHG2 260 aa13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 G3BP2Q9UN86 482 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-204ENST00000464764 KBTBD13C9JR72 458 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 UGT1A9O60656 530 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 SNRPFP62306 86 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 IRX4P78413 519 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 BST1Q10588 318 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 TRAF1Q13077 416 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 DLGAP5Q15398 846 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 ZCCHC23Q6ZST2 131 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 RAPH1Q70E73 1250 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CTAGE3PQ8IX95 158 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 ULK2Q8IYT8 1036 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 ARFGAP1Q8N6T3 406 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CCDC110Q8TBZ0 833 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 PYDC1Q8WXC3 89 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 TRAPPC9Q96Q05 1148 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 UGT1A7Q9HAW7 530 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 UGT1A10Q9HAW8 530 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 UGT1A8Q9HAW9 530 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 UBIAD1Q9Y5Z9 338 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF536O15090 1300 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 C3orf70A6NLC5 250 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CAPN14A8MX76 684 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CXorf49A8MYA2 514 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 GSTA2P09210 222 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 BMPR2Q13873 1038 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 KLHL38Q2WGJ6 581 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CFAP157Q5JU67 520 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 C1orf146Q5VVC0 180 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms