RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TMEM233B4DJY2 109 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 PPM1DO15297 605 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 URI1O94763 535 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-205ENST00000464541 ONECUT2O95948 504 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 MYL1P05976 194 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 KCNA3P22001 575 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 PDE6CP51160 858 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 MAPK10P53779 464 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 TBCCQ15814 346 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 PEG10Q86TG7 708 aaKnown RBP7.25□□□□□ -1.25
PTCD3-205ENST00000464541 RAPGEF4Q8WZA2 1011 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 RFKQ969G6 155 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 KRTAP4-2Q9BYR5 136 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 CXorf36Q9H7Y0 433 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 ALG13Q9NP73 1137 aaKnown RBP7.25□□□□□ -1.25
PTCD3-205ENST00000464541 PNPLA8Q9NP80 782 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 SERHLQ9NQF3 203 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 SERTAD3Q9UJW9 196 aa7.25□□□□□ -1.25
PTCD3-205ENST00000464541 VWC2LB2RUY7 222 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 GCOM1H8Y6P7 765 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-205ENST00000464541 RHOP08100 348 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 TXNP10599 105 aaKnown RBP7.24□□□□□ -1.25
PTCD3-205ENST00000464541 ZFXP17010 805 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-205ENST00000464541 CACNA2D1P54289 1103 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 ZIK1Q3SY52 487 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-205ENST00000464541 ZNF280BQ86YH2 543 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 YAF2Q8IY57 180 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 GPR150Q8NGU9 434 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 BPIFB1Q8TDL5 484 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 ATG4AQ8WYN0 398 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 DUSP26Q9BV47 211 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 BRIP1Q9BX63 1249 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 SLITRK6Q9H5Y7 841 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 ARNT2Q9HBZ2 717 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 TRMT13Q9NUP7 481 aaKnown RBP7.24□□□□□ -1.25
PTCD3-205ENST00000464541 SLC17A6Q9P2U8 582 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 INSL6Q9Y581 213 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 SNX13Q9Y5W8 968 aa7.24□□□□□ -1.25
PTCD3-205ENST00000464541 hCG_1984214I3L0E3 225 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 RASSF9O75901 435 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 IL18RAPO95256 599 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 CSF1RP07333 972 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 SLC5A1P13866 664 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 SOX10P56693 466 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 IFIT5Q13325 482 aaKnown RBP7.23□□□□□ -1.25
PTCD3-205ENST00000464541 DAG1Q14118 895 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 ZNF551Q7Z340 670 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-205ENST00000464541 SIMC1Q8NDZ2 872 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 SMCR8Q8TEV9 937 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-205ENST00000464541 APOL5Q9BWW9 433 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 STK31Q9BXU1 1019 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 CHST8Q9H2A9 424 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 FAM83DQ9H4H8 585 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 SYNPO2LQ9H987 977 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 GLOD4Q9HC38 313 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 TLK1Q9UKI8 766 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 FAM50BQ9Y247 325 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 MRPS17Q9Y2R5 130 aaKnown RBP7.23□□□□□ -1.25
PTCD3-205ENST00000464541 ENTPD2Q9Y5L3 495 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 CDY1Q9Y6F8 540 aa7.23□□□□□ -1.25
PTCD3-205ENST00000464541 APAF1O14727 1248 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 PMM2O15305 246 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 TTLL1O95922 423 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 ATXN1P54253 815 aaKnown RBP7.22□□□□□ -1.25
PTCD3-205ENST00000464541 PRKAG1P54619 331 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 INHBEP58166 350 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 ARHGEF7Q14155 803 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 SLC29A2Q14542 456 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 CERCAMQ5T4B2 595 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 KSR2Q6VAB6 950 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 OSCP1Q8WVF1 389 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 COLEC11Q9BWP8 271 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 SERTAD4Q9NUC0 356 aa7.22□□□□□ -1.25
PTCD3-205ENST00000464541 ZAR1LA6NP61 321 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 MT-ND5P03915 603 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 NBPF7P0C2Y1 421 aaPredicted RBP7.21□□□□□ -1.26
PTCD3-205ENST00000464541 IL1R1P14778 569 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 WT1P19544 449 aaPredicted RBP7.21□□□□□ -1.26
PTCD3-205ENST00000464541 ACVR2AP27037 513 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 PIK3CBP42338 1070 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 ALDH9A1P49189 494 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 CARSP49589 748 aaKnown RBP7.21□□□□□ -1.26
PTCD3-205ENST00000464541 CASP5P51878 434 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 ZDHHC24Q6UX98 284 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 MAVSQ7Z434 540 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 WDR53Q7Z5U6 358 aaPredicted RBP7.21□□□□□ -1.26
PTCD3-205ENST00000464541 SPARTQ8N0X7 666 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 PPP2R3CQ969Q6 453 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 SNX22Q96L94 193 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 TIMP4Q99727 224 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 TRIM5Q9C035 493 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 ARHGEF3Q9NR81 526 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 DNMT3BQ9UBC3 853 aaKnown RBP7.21□□□□□ -1.26
PTCD3-205ENST00000464541 HDAC9Q9UKV0 1011 aa7.21□□□□□ -1.26
PTCD3-205ENST00000464541 AQP7P3A6NL99 342 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 ANXA2P07355 339 aaKnown RBP7.2□□□□□ -1.26
PTCD3-205ENST00000464541 PARP1P09874 1014 aaKnown RBP7.2□□□□□ -1.26
PTCD3-205ENST00000464541 NR2F6P10588 404 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 PLA2G5P39877 138 aa7.2□□□□□ -1.26
PTCD3-205ENST00000464541 CPT1AP50416 773 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms