RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TCEAL4Q96EI5 215 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 CYFIP2Q96F07 1278 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 TMEM176AQ96HP8 235 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 SPATA17Q96L03 361 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 C8orf48Q96LL4 319 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 CEP295NLQ96MC4 621 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 FAM49BQ9NUQ9 324 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 EPS15L1Q9UBC2 864 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 LIMD1Q9UGP4 676 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 CDH7Q9ULB5 785 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 ZFP37Q9Y6Q3 630 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 DOCK8Q8NF50 2099 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 F8VP50 259 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 FGF19O95750 216 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 CCDC130P13994 396 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 HMGA1P17096 107 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 PON1P27169 355 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 CACNA2D1P54289 1103 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 TRIM65Q6PJ69 517 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 FAM35AQ86V20 835 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 RNF135Q8IUD6 432 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 DHX40Q8IX18 779 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 UBR7Q8N806 425 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 ING5Q8WYH8 240 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 KAT5Q92993 513 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 SMARCD1Q96GM5 515 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 FAM81BQ96LP2 452 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 HNRNPABQ99729 332 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 VPS16Q9H269 839 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 HSD3B7Q9H2F3 369 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 ZNF334Q9HCZ1 680 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 UBE2TQ9NPD8 197 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 TAB2Q9NYJ8 693 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 MAGED2Q9UNF1 606 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 PCDHB4Q9Y5E5 795 aa15.41■□□□□ 0.06
SQSTM1-205ENST00000464493 TNFRSF10AO00220 468 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 MOSPD3O75425 235 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 AP1G2O75843 785 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 NOL4O94818 638 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 ZNF18P17022 549 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 GJA1P17302 382 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 CEBPBP17676 345 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 ACO1P21399 889 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 GABRR2P28476 465 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 MTMR3Q13615 1198 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 ENOSF1Q7L5Y1 443 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 NPAS3Q8IXF0 933 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 STKLD1Q8NE28 680 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 SHKBP1Q8TBC3 707 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 JAKMIP2Q96AA8 810 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 MCRS1Q96EZ8 462 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 KREMEN1Q96MU8 473 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 KCNK16Q96T55 309 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 ATXN3LQ9H3M9 355 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 TMEM30AQ9NV96 361 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 GDE1Q9NZC3 331 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 UXTQ9UBK9 157 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 APEX2Q9UBZ4 518 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 LIMA1Q9UHB6 759 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 KIAA1257Q9ULG3 409 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 MYO10Q9HD67 2058 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 MYH10P35580 1976 aa15.4■□□□□ 0.06
SQSTM1-205ENST00000464493 A0A1W2PRU2 124 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 LRRC10BA6NIK2 292 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 BECN2A8MW95 431 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 DLL1O00548 723 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 NRG2O14511 850 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 FAM200BP0CF97 657 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 ADORA2BP29275 332 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 CDC25CP30307 473 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 MFAP3P55082 362 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 KCNMA1Q12791 1236 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 TEAD2Q15562 447 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 PPP1R26Q5T8A7 1209 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 TMEM270Q6UE05 265 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 DENND5BQ6ZUT9 1274 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 GAREM2Q75VX8 874 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 MYRFLQ96LU7 910 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 GPR88Q9GZN0 384 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 IL21Q9HBE4 155 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 DMAP1Q9NPF5 467 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 KRT82Q9NSB4 513 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 EHD2Q9NZN4 543 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 CUL9Q8IWT3 2517 aa15.39■□□□□ 0.05
SQSTM1-205ENST00000464493 RNF225M0QZC1 329 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 BEST1O76090 585 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 CAVIN2O95810 425 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 F11P03951 625 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 PAEPP09466 180 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 VDRP11473 427 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 COPB1P53618 953 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 MAP3K7CLP57077 242 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 APBA1Q02410 837 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 IQCB1Q15051 598 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 SGO2Q562F6 1265 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 ARHGAP17Q68EM7 881 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 GJB7Q6PEY0 223 aa15.38■□□□□ 0.05
SQSTM1-205ENST00000464493 POTEHQ6S545 545 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms